Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02204

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
2,463,894	-		MIT1002_02202	0.84	-0.9
2,463,914	-		MIT1002_02202	0.85	-1.2
2,464,098	-				-0.6
2,464,128	-				+1.3
2,464,183	-				-0.7
2,464,198	+				-1.1
2,464,206	-				-2.8
2,464,254	+				+2.6
2,464,262	-				+2.1
2,464,262	-				+1.1
2,464,266	+				+0.7
2,464,303	-				-1.7
2,464,320	-				-3.1
2,464,329	-				+0.5
2,464,329	-				-0.1
2,464,329	-				+1.1
2,464,335	+				+1.9
2,464,335	+				-0.9
2,464,375	-		MIT1002_02203	0.10	+1.1
2,464,395	+		MIT1002_02203	0.15	+0.9
2,464,828	+				-0.0
2,464,857	-				-0.4
2,464,929	-				+1.4
2,464,963	-				+0.1
2,464,974	+				-2.3
2,465,014	+		MIT1002_02204	0.14	-0.1
2,465,014	+		MIT1002_02204	0.14	-0.1
2,465,014	+		MIT1002_02204	0.14	-0.2
2,465,022	-		MIT1002_02204	0.15	-1.3
2,465,062	+		MIT1002_02204	0.19	+1.1
2,465,062	+		MIT1002_02204	0.19	+0.0
2,465,062	+		MIT1002_02204	0.19	+1.2
2,465,064	+		MIT1002_02204	0.19	+1.3
2,465,070	-		MIT1002_02204	0.20	+1.0
2,465,070	-		MIT1002_02204	0.20	+0.4
2,465,078	+		MIT1002_02204	0.21	+1.0
2,465,078	+		MIT1002_02204	0.21	+0.9
2,465,097	+		MIT1002_02204	0.23	+1.9
2,465,105	-		MIT1002_02204	0.24	-0.2
2,465,181	-		MIT1002_02204	0.33	-0.1
2,465,275	-		MIT1002_02204	0.43	+1.3
2,465,275	-		MIT1002_02204	0.43	+1.6
2,465,280	-		MIT1002_02204	0.44	+0.4
2,465,329	+		MIT1002_02204	0.50	+0.5
2,465,370	+		MIT1002_02204	0.54	+1.2
2,465,373	-		MIT1002_02204	0.55	+2.6
2,465,373	-		MIT1002_02204	0.55	-0.3
2,465,407	+		MIT1002_02204	0.59	-1.7
2,465,410	-		MIT1002_02204	0.59	-0.3
2,465,449	-		MIT1002_02204	0.63	+0.4
2,465,468	+		MIT1002_02204	0.66	+0.0
2,465,639	-		MIT1002_02204	0.85	-1.8
2,465,650	+		MIT1002_02204	0.86	-1.7
2,465,650	+		MIT1002_02204	0.86	+0.8
2,465,650	+		MIT1002_02204	0.86	+0.3
2,465,650	+		MIT1002_02204	0.86	-2.4
2,465,658	-		MIT1002_02204	0.87	-0.6
2,465,697	-				-1.8
2,465,751	+				+0.2
2,465,758	+				+0.9
2,465,759	-				+2.7
2,465,759	-				+0.4
2,465,759	-				-0.3
2,465,809	+				+1.0
2,465,819	-				-0.2
2,465,877	+				+1.1
2,465,877	+				+3.7
2,465,885	-				+2.7
2,465,978	-				-1.4
2,465,984	-				-1.3
2,465,985	-				-7.4
2,466,735	-				-2.4