Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02065

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
2,325,949	-		MIT1002_02064	0.37	+0.1
2,325,956	+		MIT1002_02064	0.37	-0.4
2,325,957	-		MIT1002_02064	0.38	+1.0
2,325,957	-		MIT1002_02064	0.38	+0.6
2,325,974	-		MIT1002_02064	0.39	-0.2
2,325,983	+		MIT1002_02064	0.39	+0.4
2,325,998	-		MIT1002_02064	0.41	-1.1
2,326,078	-		MIT1002_02064	0.47	+0.9
2,326,128	-		MIT1002_02064	0.50	+1.3
2,326,164	-		MIT1002_02064	0.53	+0.3
2,326,193	+		MIT1002_02064	0.55	+0.7
2,326,199	+		MIT1002_02064	0.56	+0.7
2,326,199	+		MIT1002_02064	0.56	+2.7
2,326,207	-		MIT1002_02064	0.56	+0.5
2,326,236	+		MIT1002_02064	0.59	+0.2
2,326,419	-		MIT1002_02064	0.72	+0.3
2,326,557	+		MIT1002_02064	0.83	+1.8
2,326,557	+		MIT1002_02064	0.83	+1.7
2,326,557	+		MIT1002_02064	0.83	+0.5
2,326,682	+				+0.9
2,326,690	-				+1.1
2,326,690	-				+0.3
2,326,713	-				-0.6
2,326,776	+				+0.4
2,326,776	+				+3.4
2,326,776	+				-0.2
2,326,789	+				-1.6
2,326,884	+		MIT1002_02065	0.13	-0.4
2,326,968	+		MIT1002_02065	0.22	-0.6
2,326,976	-		MIT1002_02065	0.23	-0.8
2,327,022	-		MIT1002_02065	0.29	+0.0
2,327,093	+		MIT1002_02065	0.37	-0.3
2,327,131	+		MIT1002_02065	0.42	+0.7
2,327,139	-		MIT1002_02065	0.43	+0.9
2,327,173	-		MIT1002_02065	0.47	+0.4
2,327,191	+		MIT1002_02065	0.49	+0.5
2,327,191	+		MIT1002_02065	0.49	-3.2
2,327,191	+		MIT1002_02065	0.49	+0.5
2,327,191	+		MIT1002_02065	0.49	-1.3
2,327,199	-		MIT1002_02065	0.50	-0.1
2,327,224	-		MIT1002_02065	0.53	-1.5
2,327,285	-		MIT1002_02065	0.60	-0.0
2,327,361	+		MIT1002_02065	0.69	+1.1
2,327,526	-		MIT1002_02065	0.88	-1.9
2,327,656	+				+1.0
2,327,770	+		MIT1002_02066	0.32	-0.9
2,327,778	-		MIT1002_02066	0.35	-0.1
2,327,906	-		MIT1002_02066	0.73	-1.7
2,327,932	-		MIT1002_02066	0.80	-1.0
2,327,958	+		MIT1002_02066	0.88	-0.9
2,327,962	+		MIT1002_02066	0.89	+0.8
2,327,973	+				-1.5
2,327,981	-				-0.9
2,327,982	+				+0.5
2,327,982	+				-0.7
2,327,990	-				-1.6
2,328,094	+		MIT1002_02067	0.41	+1.8
2,328,105	-		MIT1002_02067	0.45	-2.3
2,328,128	+		MIT1002_02067	0.54	-0.7
2,328,128	+		MIT1002_02067	0.54	+1.0
2,328,128	+		MIT1002_02067	0.54	+0.4
2,328,128	+		MIT1002_02067	0.54	-1.7
2,328,136	-		MIT1002_02067	0.57	+0.7
2,328,136	-		MIT1002_02067	0.57	+1.6
2,328,136	-		MIT1002_02067	0.57	+1.8
2,328,136	-		MIT1002_02067	0.57	-0.2
2,328,138	-		MIT1002_02067	0.58	+1.4
2,328,176	+		MIT1002_02067	0.72	-0.7
2,328,268	+				+1.2
2,328,268	+				-2.1
2,328,287	+				+0.5
2,328,295	-				-1.6
2,328,336	+				-0.3
2,328,337	-				+0.8
2,328,360	+				+0.0
2,328,376	+				+0.0
2,328,379	-				-1.4
2,328,384	-				+0.6
2,328,384	-				+0.1
2,328,403	+		MIT1002_02068	0.10	-1.5
2,328,403	+		MIT1002_02068	0.10	+0.5
2,328,411	-		MIT1002_02068	0.11	+0.7
2,328,421	+		MIT1002_02068	0.11	+0.8