Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01492

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
1,649,382	-		MIT1002_01490	0.89	-1.5
1,649,447	-				+0.0
1,649,461	+				-0.8
1,649,494	-				-0.4
1,649,500	-				+0.6
1,649,554	+				+0.6
1,649,648	+				+0.5
1,649,679	-				-1.1
1,649,759	-				+0.0
1,649,759	-				-0.4
1,649,857	+		MIT1002_01491	0.23	-1.2
1,649,859	+		MIT1002_01491	0.23	+0.2
1,649,865	-		MIT1002_01491	0.24	+0.4
1,649,865	-		MIT1002_01491	0.24	+1.2
1,650,012	+		MIT1002_01491	0.50	+0.7
1,650,034	-		MIT1002_01491	0.54	-0.6
1,650,062	-		MIT1002_01491	0.59	-1.8
1,650,084	+		MIT1002_01491	0.63	+0.2
1,650,092	-		MIT1002_01491	0.65	+0.8
1,650,131	-		MIT1002_01491	0.72	+0.0
1,650,139	-		MIT1002_01491	0.73	-0.6
1,650,139	-		MIT1002_01491	0.73	+0.5
1,650,160	+		MIT1002_01491	0.77	-0.2
1,650,207	-		MIT1002_01491	0.85	-2.1
1,650,207	-		MIT1002_01491	0.85	+0.5
1,650,260	-				-0.3
1,650,303	-				+0.5
1,650,403	+				-1.1
1,650,414	+				-1.4
1,650,422	-				+1.1
1,650,506	-		MIT1002_01492	0.20	-0.9
1,650,506	-		MIT1002_01492	0.20	-1.1
1,650,508	-		MIT1002_01492	0.20	-0.1
1,650,552	+		MIT1002_01492	0.28	+0.2
1,650,650	-		MIT1002_01492	0.43	+0.7
1,650,676	-		MIT1002_01492	0.48	-0.4
1,650,676	-		MIT1002_01492	0.48	-0.4
1,650,737	+		MIT1002_01492	0.57	+0.0
1,650,738	-		MIT1002_01492	0.57	+0.1
1,650,738	-		MIT1002_01492	0.57	+2.0
1,650,743	-		MIT1002_01492	0.58	+2.3
1,650,786	-		MIT1002_01492	0.65	-1.1
1,650,787	+		MIT1002_01492	0.65	+0.6
1,650,793	+		MIT1002_01492	0.66	+0.7
1,650,797	+		MIT1002_01492	0.67	+1.3
1,650,803	+		MIT1002_01492	0.68	+1.0
1,650,803	+		MIT1002_01492	0.68	-1.9
1,650,803	+		MIT1002_01492	0.68	+0.5
1,650,803	+		MIT1002_01492	0.68	-0.1
1,650,803	+		MIT1002_01492	0.68	+0.5
1,650,803	+		MIT1002_01492	0.68	-1.2
1,650,803	+		MIT1002_01492	0.68	+0.8
1,650,803	+		MIT1002_01492	0.68	-0.1
1,650,803	+		MIT1002_01492	0.68	-0.2
1,650,803	+		MIT1002_01492	0.68	-0.1
1,650,803	+		MIT1002_01492	0.68	-0.4
1,650,811	-		MIT1002_01492	0.69	-0.2
1,650,811	-		MIT1002_01492	0.69	-0.1
1,650,811	-		MIT1002_01492	0.69	+0.1
1,650,811	-		MIT1002_01492	0.69	+0.3
1,650,811	-		MIT1002_01492	0.69	-0.4
1,650,811	-		MIT1002_01492	0.69	+0.2
1,650,811	-		MIT1002_01492	0.69	-2.0
1,650,811	-		MIT1002_01492	0.69	+0.0
1,650,820	-		MIT1002_01492	0.71	-1.1
1,650,835	-		MIT1002_01492	0.73	-0.1
1,650,848	+		MIT1002_01492	0.75	-1.7
1,650,850	+		MIT1002_01492	0.76	+0.3
1,650,861	+		MIT1002_01492	0.77	-0.0
1,650,862	+		MIT1002_01492	0.77	+0.5
1,650,986	+				-1.7
1,650,986	+				-0.1
1,650,986	+				+1.3
1,650,991	+				+0.8
1,650,994	-				+0.2
1,650,994	-				+0.8
1,651,122	+		MIT1002_01493	0.11	-1.3
1,651,128	-		MIT1002_01493	0.12	+1.4
1,651,130	-		MIT1002_01493	0.12	+0.1
1,651,140	+		MIT1002_01493	0.13	+0.4
1,651,142	+		MIT1002_01493	0.14	+0.2
1,651,148	-		MIT1002_01493	0.15	+0.5
1,651,236	-		MIT1002_01493	0.28	+0.9
1,651,313	+		MIT1002_01493	0.40	-0.5
1,651,401	+		MIT1002_01493	0.53	+0.4
1,651,401	+		MIT1002_01493	0.53	+0.2
1,651,439	+		MIT1002_01493	0.59	-1.2
1,651,457	-		MIT1002_01493	0.62	-0.4
1,651,481	-		MIT1002_01493	0.65	-0.5
1,651,501	-		MIT1002_01493	0.68	-1.3
1,651,528	-		MIT1002_01493	0.72	+0.6
1,651,530	-		MIT1002_01493	0.73	+0.4
1,651,608	+		MIT1002_01493	0.85	+1.7
1,651,608	+		MIT1002_01493	0.85	-1.2
1,651,608	-		MIT1002_01493	0.85	-0.6
1,651,616	-		MIT1002_01493	0.86	-0.5
1,651,616	-		MIT1002_01493	0.86	-2.3
1,651,623	+		MIT1002_01493	0.87	-0.9
1,651,625	+		MIT1002_01493	0.87	-0.5
1,651,631	-		MIT1002_01493	0.88	-0.2
1,651,639	+		MIT1002_01493	0.89	-0.2
1,651,675	+				+0.2
1,651,708	-				+0.2
1,651,708	-				+0.3
1,651,830	-				-0.9
1,651,879	-				-1.5
1,651,920	-				-1.8
1,651,920	-				+0.1