Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01102

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
1,209,512	-		MIT1002_01101	0.34	-1.9
1,209,542	+		MIT1002_01101	0.36	-0.5
1,209,560	-		MIT1002_01101	0.37	-0.7
1,209,666	+		MIT1002_01101	0.45	+0.3
1,209,666	+		MIT1002_01101	0.45	-2.6
1,209,666	+		MIT1002_01101	0.45	-1.0
1,209,666	+		MIT1002_01101	0.45	-0.5
1,209,669	-		MIT1002_01101	0.45	-0.7
1,209,674	-		MIT1002_01101	0.45	+0.4
1,209,674	-		MIT1002_01101	0.45	-0.8
1,209,700	+		MIT1002_01101	0.47	-1.4
1,209,714	+		MIT1002_01101	0.48	+1.0
1,209,736	+		MIT1002_01101	0.50	-1.3
1,209,799	-		MIT1002_01101	0.54	-1.7
1,209,823	+		MIT1002_01101	0.56	-0.4
1,209,931	-		MIT1002_01101	0.64	-0.1
1,209,974	-		MIT1002_01101	0.67	-1.4
1,210,066	+		MIT1002_01101	0.73	-0.7
1,210,066	+		MIT1002_01101	0.73	-0.1
1,210,176	+		MIT1002_01101	0.81	-1.8
1,210,237	+		MIT1002_01101	0.85	-3.3
1,210,247	+		MIT1002_01101	0.86	-1.4
1,210,247	+		MIT1002_01101	0.86	+0.2
1,210,255	-		MIT1002_01101	0.87	-0.0
1,210,255	-		MIT1002_01101	0.87	-1.0
1,210,255	-		MIT1002_01101	0.87	-0.9
1,210,255	-		MIT1002_01101	0.87	-0.3
1,210,260	-		MIT1002_01101	0.87	+1.0
1,210,263	-		MIT1002_01101	0.87	+0.9
1,210,263	-		MIT1002_01101	0.87	-0.7
1,210,289	-		MIT1002_01101	0.89	+0.7
1,210,324	+				-2.0
1,210,337	+				-1.7
1,210,383	-				-1.3
1,210,398	+				-0.2
1,210,404	+				+0.6
1,210,536	-		MIT1002_01102	0.10	-0.8
1,210,585	+		MIT1002_01102	0.16	+0.0
1,210,586	+		MIT1002_01102	0.16	+0.4
1,210,612	+		MIT1002_01102	0.19	-1.6
1,210,613	+		MIT1002_01102	0.19	-1.2
1,210,629	+		MIT1002_01102	0.21	-1.7
1,210,689	+		MIT1002_01102	0.28	-2.2
1,210,796	+		MIT1002_01102	0.40	-1.3
1,210,796	+		MIT1002_01102	0.40	-2.5
1,210,804	-		MIT1002_01102	0.41	-1.8
1,210,877	+		MIT1002_01102	0.49	-0.7
1,210,885	-		MIT1002_01102	0.50	-0.8
1,210,885	-		MIT1002_01102	0.50	-0.3
1,210,904	-		MIT1002_01102	0.53	-1.7
1,210,911	+		MIT1002_01102	0.53	-1.8
1,211,230	+				-2.7
1,211,377	-				+0.0
1,211,390	-		MIT1002_01103	0.11	+1.0
1,211,396	-		MIT1002_01103	0.12	-1.2
1,211,469	+		MIT1002_01103	0.22	+0.4
1,211,518	-		MIT1002_01103	0.28	+1.3
1,211,551	-		MIT1002_01103	0.33	-1.5
1,211,571	+		MIT1002_01103	0.36	+1.0
1,211,579	-		MIT1002_01103	0.37	-0.4
1,211,579	-		MIT1002_01103	0.37	+3.0
1,211,579	-		MIT1002_01103	0.37	-1.0
1,211,579	-		MIT1002_01103	0.37	-0.2
1,211,750	-		MIT1002_01103	0.60	+2.3
1,211,812	+		MIT1002_01103	0.68	+0.2
1,211,882	-		MIT1002_01103	0.78	-1.8
1,211,904	+		MIT1002_01103	0.81	-1.0
1,212,026	-				+0.5
1,212,084	-				-0.8
1,212,084	-				-1.9
1,212,208	+		MIT1002_01104	0.31	+0.7
1,212,277	-		MIT1002_01104	0.50	+0.6