Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00891

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
981,123	+		MIT1002_00890	0.70	-0.0
981,131	-		MIT1002_00890	0.70	-1.9
981,276	-		MIT1002_00890	0.78	-0.2
981,300	-		MIT1002_00890	0.79	+2.8
981,323	-		MIT1002_00890	0.80	-2.5
981,349	+		MIT1002_00890	0.81	+1.4
981,357	-		MIT1002_00890	0.82	-0.5
981,369	+		MIT1002_00890	0.83	+0.2
981,369	-		MIT1002_00890	0.83	-0.4
981,371	+		MIT1002_00890	0.83	-1.1
981,371	+		MIT1002_00890	0.83	+0.9
981,371	+		MIT1002_00890	0.83	-1.3
981,377	-		MIT1002_00890	0.83	-2.3
981,379	-		MIT1002_00890	0.83	-0.7
981,379	-		MIT1002_00890	0.83	-2.1
981,379	-		MIT1002_00890	0.83	+2.2
981,410	+		MIT1002_00890	0.85	-0.1
981,410	+		MIT1002_00890	0.85	-1.3
981,434	+		MIT1002_00890	0.86	+0.8
981,609	+				-0.1
981,677	+				-2.1
981,701	+				+1.4
981,783	-				-0.2
981,824	+				-0.4
981,829	-				+1.4
981,921	+				-0.9
981,969	-				-1.7
982,008	-				+0.2
982,090	+		MIT1002_00891	0.12	-0.2
982,218	-		MIT1002_00891	0.36	+0.0
982,257	+		MIT1002_00891	0.43	-1.7
982,264	+		MIT1002_00891	0.44	+0.5
982,267	-		MIT1002_00891	0.45	+0.0
982,272	-		MIT1002_00891	0.46	-2.7
982,282	+		MIT1002_00891	0.47	+1.6
982,366	-		MIT1002_00891	0.63	-0.2
982,488	-		MIT1002_00891	0.86	-2.2
982,509	-		MIT1002_00891	0.90	+1.5
982,533	-				+0.2
982,550	+				-0.8
982,566	-				+0.4
982,588	-				+0.6