Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00030

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
31,254	-		MIT1002_00028	0.62	-1.6
31,263	+		MIT1002_00028	0.64	-0.4
31,263	+		MIT1002_00028	0.64	+0.3
31,263	+		MIT1002_00028	0.64	+0.5
31,263	+		MIT1002_00028	0.64	-0.8
31,275	+		MIT1002_00028	0.67	-0.3
31,336	+		MIT1002_00028	0.81	-0.7
31,345	+		MIT1002_00028	0.83	+0.4
32,340	+		MIT1002_00030	0.16	-0.2
32,403	+		MIT1002_00030	0.28	-0.6
32,430	-		MIT1002_00030	0.33	-0.3
32,511	+		MIT1002_00030	0.48	+0.8
32,511	+		MIT1002_00030	0.48	+1.9
32,511	+		MIT1002_00030	0.48	-0.5
32,514	-		MIT1002_00030	0.48	-1.5
32,518	+		MIT1002_00030	0.49	-1.1
32,519	-		MIT1002_00030	0.49	-0.2
32,519	-		MIT1002_00030	0.49	-0.9
32,524	-		MIT1002_00030	0.50	+0.0
32,524	-		MIT1002_00030	0.50	-0.6
32,526	-		MIT1002_00030	0.51	-1.3
32,526	-		MIT1002_00030	0.51	+0.4
32,587	-		MIT1002_00030	0.62	-0.4
32,593	+		MIT1002_00030	0.63	-0.1
32,603	-		MIT1002_00030	0.65	-2.2
32,802	+				-1.5
32,802	+				-1.0
32,810	-				-2.6
32,875	+				-0.7
32,895	+				-0.6
32,896	-				-2.7
32,915	+				+0.9
32,923	-				-0.1
33,005	+				-0.1
33,085	+				-0.7
33,085	+				+0.3
33,085	+				-0.8
33,093	-				+0.0
33,093	-				+0.1
33,093	-				+1.0
33,093	-				-1.0
33,093	-				+1.2
33,126	+		MIT1002_00031	0.11	+1.2
33,134	+		MIT1002_00031	0.12	-2.0
33,167	+		MIT1002_00031	0.15	-0.2
33,182	+		MIT1002_00031	0.17	-0.8
33,191	+		MIT1002_00031	0.18	-1.2
33,240	+		MIT1002_00031	0.22	-2.1
33,240	+		MIT1002_00031	0.22	+1.2
33,240	+		MIT1002_00031	0.22	-1.2
33,247	-		MIT1002_00031	0.23	+1.7
33,247	-		MIT1002_00031	0.23	+0.8
33,248	-		MIT1002_00031	0.23	-0.6
33,248	-		MIT1002_00031	0.23	-0.4
33,292	+		MIT1002_00031	0.27	+0.8
33,295	-		MIT1002_00031	0.28	-0.8
33,335	+		MIT1002_00031	0.31	-1.5
33,340	+		MIT1002_00031	0.32	-0.3
33,340	+		MIT1002_00031	0.32	-0.5
33,340	+		MIT1002_00031	0.32	-1.4
33,340	+		MIT1002_00031	0.32	-2.8
33,340	+		MIT1002_00031	0.32	-2.3
33,340	+		MIT1002_00031	0.32	-0.5
33,342	+		MIT1002_00031	0.32	-2.3
33,343	-		MIT1002_00031	0.32	+0.2
33,343	-		MIT1002_00031	0.32	-0.8
33,345	+		MIT1002_00031	0.32	+0.0
33,347	+		MIT1002_00031	0.33	-0.8
33,348	-		MIT1002_00031	0.33	-0.4
33,358	+		MIT1002_00031	0.34	-2.3
33,372	+		MIT1002_00031	0.35	+0.7
33,372	+		MIT1002_00031	0.35	+0.7
33,412	+		MIT1002_00031	0.39	+0.3
33,420	-		MIT1002_00031	0.40	-0.6
33,426	+		MIT1002_00031	0.40	-1.4
33,430	-		MIT1002_00031	0.41	-1.2
33,434	-		MIT1002_00031	0.41	-1.3
33,509	+		MIT1002_00031	0.48	-1.5
33,509	+		MIT1002_00031	0.48	-1.0
33,517	-		MIT1002_00031	0.49	-0.9
33,530	-		MIT1002_00031	0.50	-0.3
33,616	+		MIT1002_00031	0.58	+0.5
33,622	-		MIT1002_00031	0.59	+1.1
33,622	-		MIT1002_00031	0.59	-0.1
33,704	+		MIT1002_00031	0.67	-1.2