Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS34485 and QEN71_RS34490 are separated by 30 nucleotides QEN71_RS34490 and QEN71_RS34495 are separated by 29 nucleotides QEN71_RS34495 and QEN71_RS34500 are separated by 27 nucleotides
QEN71_RS34485: QEN71_RS34485 - FAD-binding oxidoreductase, at 1,051,580 to 1,052,881
_RS34485
QEN71_RS34490: QEN71_RS34490 - cupin domain-containing protein, at 1,052,912 to 1,053,280
_RS34490
QEN71_RS34495: QEN71_RS34495 - cyclopropane-fatty-acyl-phospholipid synthase family protein, at 1,053,310 to 1,054,251
_RS34495
QEN71_RS34500: QEN71_RS34500 - chloride channel protein, at 1,054,279 to 1,056,099
_RS34500
Position (kb)
1052
1053
1054 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1051.926 kb on - strand, within QEN71_RS34485 at 1051.961 kb on + strand, within QEN71_RS34485 at 1051.971 kb on - strand, within QEN71_RS34485 at 1052.037 kb on - strand, within QEN71_RS34485 at 1052.048 kb on + strand, within QEN71_RS34485 at 1052.093 kb on + strand, within QEN71_RS34485 at 1052.114 kb on - strand, within QEN71_RS34485 at 1052.202 kb on - strand, within QEN71_RS34485 at 1052.202 kb on - strand, within QEN71_RS34485 at 1052.202 kb on - strand, within QEN71_RS34485 at 1052.225 kb on + strand, within QEN71_RS34485 at 1052.348 kb on + strand, within QEN71_RS34485 at 1052.355 kb on - strand, within QEN71_RS34485 at 1052.355 kb on - strand, within QEN71_RS34485 at 1052.421 kb on - strand, within QEN71_RS34485 at 1052.447 kb on + strand, within QEN71_RS34485 at 1052.450 kb on + strand, within QEN71_RS34485 at 1052.682 kb on - strand, within QEN71_RS34485 at 1052.905 kb on + strand at 1052.939 kb on - strand at 1053.068 kb on + strand, within QEN71_RS34490 at 1053.069 kb on - strand, within QEN71_RS34490 at 1053.069 kb on - strand, within QEN71_RS34490 at 1053.172 kb on + strand, within QEN71_RS34490 at 1053.264 kb on - strand at 1053.378 kb on - strand at 1053.426 kb on - strand, within QEN71_RS34495 at 1053.520 kb on + strand, within QEN71_RS34495 at 1053.626 kb on + strand, within QEN71_RS34495 at 1053.746 kb on + strand, within QEN71_RS34495 at 1053.841 kb on + strand, within QEN71_RS34495 at 1053.841 kb on + strand, within QEN71_RS34495 at 1054.097 kb on + strand, within QEN71_RS34495 at 1054.248 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 1,051,926 - QEN71_RS34485 0.27 +0.7 1,051,961 + QEN71_RS34485 0.29 -0.5 1,051,971 - QEN71_RS34485 0.30 -0.5 1,052,037 - QEN71_RS34485 0.35 +1.6 1,052,048 + QEN71_RS34485 0.36 +0.7 1,052,093 + QEN71_RS34485 0.39 +0.1 1,052,114 - QEN71_RS34485 0.41 -0.0 1,052,202 - QEN71_RS34485 0.48 +1.2 1,052,202 - QEN71_RS34485 0.48 +0.5 1,052,202 - QEN71_RS34485 0.48 -0.0 1,052,225 + QEN71_RS34485 0.50 +1.0 1,052,348 + QEN71_RS34485 0.59 -1.8 1,052,355 - QEN71_RS34485 0.60 +0.8 1,052,355 - QEN71_RS34485 0.60 +0.4 1,052,421 - QEN71_RS34485 0.65 +0.1 1,052,447 + QEN71_RS34485 0.67 +1.2 1,052,450 + QEN71_RS34485 0.67 -0.4 1,052,682 - QEN71_RS34485 0.85 -0.6 1,052,905 + -1.0 1,052,939 - -1.1 1,053,068 + QEN71_RS34490 0.42 -1.3 1,053,069 - QEN71_RS34490 0.43 +0.0 1,053,069 - QEN71_RS34490 0.43 -1.0 1,053,172 + QEN71_RS34490 0.70 -0.0 1,053,264 - -0.8 1,053,378 - +1.0 1,053,426 - QEN71_RS34495 0.12 -0.8 1,053,520 + QEN71_RS34495 0.22 +0.1 1,053,626 + QEN71_RS34495 0.34 +2.6 1,053,746 + QEN71_RS34495 0.46 -0.2 1,053,841 + QEN71_RS34495 0.56 -0.1 1,053,841 + QEN71_RS34495 0.56 -0.4 1,054,097 + QEN71_RS34495 0.84 -0.1 1,054,248 - -1.8
Or see this region's nucleotide sequence