Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS33955 and QEN71_RS33960 overlap by 13 nucleotides QEN71_RS33960 and QEN71_RS33965 are separated by 14 nucleotides QEN71_RS33965 and QEN71_RS33970 overlap by 4 nucleotides QEN71_RS33970 and QEN71_RS33975 are separated by 27 nucleotides
QEN71_RS33955: QEN71_RS33955 - amidophosphoribosyltransferase, at 933,801 to 934,709
_RS33955
QEN71_RS33960: QEN71_RS33960 - protein glxC, at 934,697 to 935,395
_RS33960
QEN71_RS33965: QEN71_RS33965 - FMN-binding glutamate synthase family protein, at 935,410 to 936,777
_RS33965
QEN71_RS33970: QEN71_RS33970 - bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD, at 936,774 to 937,673
_RS33970
QEN71_RS33975: QEN71_RS33975 - aspartate aminotransferase family protein, at 937,701 to 939,152
_RS33975
Position (kb) 935
936
937 Strain fitness (log2 ratio) -2
-1
0
1 at 934.513 kb on - strand, within QEN71_RS33955 at 934.692 kb on + strand at 934.692 kb on + strand at 934.692 kb on + strand at 934.692 kb on + strand at 934.692 kb on + strand at 934.692 kb on + strand at 934.692 kb on + strand at 934.693 kb on - strand at 934.693 kb on - strand at 934.693 kb on - strand at 934.693 kb on - strand at 934.693 kb on - strand at 934.697 kb on - strand at 934.697 kb on - strand at 934.974 kb on + strand, within QEN71_RS33960 at 934.974 kb on + strand, within QEN71_RS33960 at 934.975 kb on - strand, within QEN71_RS33960 at 934.975 kb on - strand, within QEN71_RS33960 at 935.183 kb on + strand, within QEN71_RS33960 at 935.184 kb on - strand, within QEN71_RS33960 at 935.198 kb on + strand, within QEN71_RS33960 at 935.198 kb on + strand, within QEN71_RS33960 at 935.198 kb on + strand, within QEN71_RS33960 at 935.198 kb on + strand, within QEN71_RS33960 at 935.198 kb on + strand, within QEN71_RS33960 at 935.198 kb on + strand, within QEN71_RS33960 at 935.199 kb on - strand, within QEN71_RS33960 at 935.199 kb on - strand, within QEN71_RS33960 at 935.360 kb on + strand at 935.360 kb on + strand at 935.361 kb on - strand at 935.361 kb on - strand at 935.361 kb on - strand at 935.426 kb on + strand at 935.427 kb on - strand at 935.485 kb on + strand at 935.485 kb on + strand at 935.515 kb on + strand at 935.516 kb on - strand at 935.597 kb on - strand, within QEN71_RS33965 at 935.833 kb on + strand, within QEN71_RS33965 at 935.834 kb on - strand, within QEN71_RS33965 at 935.834 kb on - strand, within QEN71_RS33965 at 936.104 kb on - strand, within QEN71_RS33965 at 936.104 kb on - strand, within QEN71_RS33965 at 936.421 kb on - strand, within QEN71_RS33965 at 936.431 kb on - strand, within QEN71_RS33965 at 936.604 kb on + strand, within QEN71_RS33965 at 936.605 kb on - strand, within QEN71_RS33965 at 936.605 kb on - strand, within QEN71_RS33965 at 936.918 kb on + strand, within QEN71_RS33970 at 936.918 kb on + strand, within QEN71_RS33970 at 936.919 kb on - strand, within QEN71_RS33970 at 937.146 kb on + strand, within QEN71_RS33970 at 937.146 kb on + strand, within QEN71_RS33970 at 937.147 kb on - strand, within QEN71_RS33970 at 937.147 kb on - strand, within QEN71_RS33970 at 937.200 kb on + strand, within QEN71_RS33970 at 937.226 kb on + strand, within QEN71_RS33970 at 937.278 kb on - strand, within QEN71_RS33970 at 937.671 kb on + strand at 937.672 kb on - strand at 937.672 kb on - strand at 937.712 kb on + strand at 937.712 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 934,513 - QEN71_RS33955 0.78 +0.3 934,692 + +0.8 934,692 + +0.3 934,692 + -2.5 934,692 + +0.3 934,692 + -1.2 934,692 + -0.3 934,692 + -0.2 934,693 - +0.1 934,693 - -1.7 934,693 - +0.5 934,693 - -0.0 934,693 - +0.8 934,697 - +0.3 934,697 - -0.6 934,974 + QEN71_RS33960 0.40 -0.2 934,974 + QEN71_RS33960 0.40 -0.0 934,975 - QEN71_RS33960 0.40 -1.6 934,975 - QEN71_RS33960 0.40 -1.6 935,183 + QEN71_RS33960 0.70 -0.5 935,184 - QEN71_RS33960 0.70 +0.6 935,198 + QEN71_RS33960 0.72 -0.7 935,198 + QEN71_RS33960 0.72 -1.9 935,198 + QEN71_RS33960 0.72 -0.2 935,198 + QEN71_RS33960 0.72 +0.4 935,198 + QEN71_RS33960 0.72 +0.2 935,198 + QEN71_RS33960 0.72 -0.1 935,199 - QEN71_RS33960 0.72 -1.1 935,199 - QEN71_RS33960 0.72 -1.4 935,360 + -1.8 935,360 + -0.9 935,361 - +0.3 935,361 - -0.1 935,361 - +0.1 935,426 + -0.7 935,427 - +1.7 935,485 + -1.0 935,485 + -0.7 935,515 + +0.1 935,516 - -0.5 935,597 - QEN71_RS33965 0.14 +1.5 935,833 + QEN71_RS33965 0.31 -0.7 935,834 - QEN71_RS33965 0.31 -0.5 935,834 - QEN71_RS33965 0.31 -0.4 936,104 - QEN71_RS33965 0.51 +0.1 936,104 - QEN71_RS33965 0.51 +0.6 936,421 - QEN71_RS33965 0.74 -2.3 936,431 - QEN71_RS33965 0.75 +1.7 936,604 + QEN71_RS33965 0.87 +0.4 936,605 - QEN71_RS33965 0.87 -0.2 936,605 - QEN71_RS33965 0.87 +0.3 936,918 + QEN71_RS33970 0.16 -0.7 936,918 + QEN71_RS33970 0.16 -0.6 936,919 - QEN71_RS33970 0.16 +0.6 937,146 + QEN71_RS33970 0.41 -0.8 937,146 + QEN71_RS33970 0.41 +0.2 937,147 - QEN71_RS33970 0.41 +0.4 937,147 - QEN71_RS33970 0.41 +0.0 937,200 + QEN71_RS33970 0.47 -0.2 937,226 + QEN71_RS33970 0.50 -0.5 937,278 - QEN71_RS33970 0.56 +0.0 937,671 + +0.3 937,672 - +0.2 937,672 - -0.8 937,712 + -0.1 937,712 + -0.6
Or see this region's nucleotide sequence