Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04046

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5
4,541,264	-		MIT1002_04045	0.42	+0.2
4,541,292	-		MIT1002_04045	0.44	-0.8
4,541,395	-		MIT1002_04045	0.51	-3.2
4,541,415	+		MIT1002_04045	0.52	+0.6
4,541,418	-		MIT1002_04045	0.52	+0.2
4,541,423	-		MIT1002_04045	0.53	-3.3
4,541,470	-		MIT1002_04045	0.56	-2.4
4,541,560	-		MIT1002_04045	0.62	-3.0
4,541,584	-		MIT1002_04045	0.63	-2.8
4,541,816	-		MIT1002_04045	0.79	-3.5
4,541,994	-				-2.9
4,541,995	-				-2.5
4,542,024	-				-3.0
4,542,068	-				+0.3
4,542,119	+				+0.8
4,542,135	+				-1.5
4,542,151	-				+0.1
4,542,194	+				+1.4
4,542,234	-				-1.9
4,542,254	-				-0.3
4,542,267	+				-2.6
4,542,380	+				+0.1
4,542,388	-		MIT1002_04046	0.10	-1.1
4,542,429	+		MIT1002_04046	0.14	+0.2
4,542,469	+		MIT1002_04046	0.17	+2.3
4,542,576	+		MIT1002_04046	0.25	-0.3
4,542,584	-		MIT1002_04046	0.26	-1.5
4,542,584	-		MIT1002_04046	0.26	+0.8
4,542,677	-		MIT1002_04046	0.34	+0.5
4,542,677	-		MIT1002_04046	0.34	-1.1
4,542,710	-		MIT1002_04046	0.36	+0.2
4,542,768	+		MIT1002_04046	0.41	+0.8
4,542,797	+		MIT1002_04046	0.43	-0.4
4,542,797	+		MIT1002_04046	0.43	-0.4
4,542,805	+		MIT1002_04046	0.44	-0.2
4,542,805	-		MIT1002_04046	0.44	+2.0
4,542,812	-		MIT1002_04046	0.44	+0.8
4,542,812	-		MIT1002_04046	0.44	+0.8
4,542,812	-		MIT1002_04046	0.44	-0.2
4,542,812	-		MIT1002_04046	0.44	-0.2
4,542,813	-		MIT1002_04046	0.44	+0.2
4,542,818	+		MIT1002_04046	0.45	-1.7
4,542,894	-		MIT1002_04046	0.51	-1.1
4,542,978	+		MIT1002_04046	0.58	+0.8
4,542,986	-		MIT1002_04046	0.58	+2.2
4,543,079	+		MIT1002_04046	0.66	-1.3
4,543,087	-		MIT1002_04046	0.66	+0.8
4,543,087	-		MIT1002_04046	0.66	+1.4
4,543,127	+		MIT1002_04046	0.70	+0.8
4,543,135	-		MIT1002_04046	0.70	-0.6
4,543,215	-		MIT1002_04046	0.77	+0.9
4,543,242	+		MIT1002_04046	0.79	+0.6
4,543,339	-		MIT1002_04046	0.87	+1.0
4,543,376	+		MIT1002_04046	0.90	-0.3
4,543,411	+				-0.5
4,543,463	+				-1.9
4,543,463	-				-0.2
4,543,473	+				-1.8
4,543,481	-				-1.5
4,543,574	-				+0.7
4,543,803	+				-0.2
4,543,860	+		MIT1002_04047	0.11	+2.3
4,543,898	+		MIT1002_04047	0.13	+1.2
4,543,911	+		MIT1002_04047	0.13	-0.5
4,543,916	+		MIT1002_04047	0.14	-0.1
4,543,924	-		MIT1002_04047	0.14	-0.5
4,544,057	-		MIT1002_04047	0.21	-1.2
4,544,137	-		MIT1002_04047	0.25	-1.7
4,544,147	+		MIT1002_04047	0.25	-0.0
4,544,147	-		MIT1002_04047	0.25	+0.7
4,544,160	-		MIT1002_04047	0.26	+0.4
4,544,201	-		MIT1002_04047	0.28	-0.9
4,544,221	+		MIT1002_04047	0.29	-0.3
4,544,228	+		MIT1002_04047	0.29	+1.5
4,544,234	-		MIT1002_04047	0.30	-0.6
4,544,236	-		MIT1002_04047	0.30	-2.5
4,544,236	-		MIT1002_04047	0.30	-0.2
4,544,250	+		MIT1002_04047	0.30	+0.2
4,544,250	-		MIT1002_04047	0.30	-1.2
4,544,262	+		MIT1002_04047	0.31	-1.7
4,544,272	-		MIT1002_04047	0.31	-0.0
4,544,274	+		MIT1002_04047	0.32	-0.0
4,544,280	-		MIT1002_04047	0.32	-0.8
4,544,282	-		MIT1002_04047	0.32	-0.0
4,544,301	+		MIT1002_04047	0.33	+1.0
4,544,309	-		MIT1002_04047	0.33	+1.2
4,544,309	-		MIT1002_04047	0.33	-0.6
4,544,332	+		MIT1002_04047	0.34	+0.9
4,544,340	-		MIT1002_04047	0.35	+0.8
4,544,390	+		MIT1002_04047	0.37	+1.5
4,544,398	-		MIT1002_04047	0.38	-2.5
4,544,449	-		MIT1002_04047	0.40	-0.0