Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03634

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5
4,059,788	+		MIT1002_03633	0.67	+2.3
4,059,892	-		MIT1002_03633	0.72	+1.0
4,059,922	+		MIT1002_03633	0.74	+0.7
4,059,922	+		MIT1002_03633	0.74	-0.9
4,059,922	+		MIT1002_03633	0.74	+0.2
4,059,927	+		MIT1002_03633	0.74	-2.8
4,059,930	-		MIT1002_03633	0.74	+1.0
4,059,930	-		MIT1002_03633	0.74	-1.4
4,059,942	-		MIT1002_03633	0.75	-0.5
4,059,985	+		MIT1002_03633	0.77	+2.7
4,060,030	+		MIT1002_03633	0.79	+0.1
4,060,030	+		MIT1002_03633	0.79	+0.6
4,060,035	+		MIT1002_03633	0.79	+0.6
4,060,181	+		MIT1002_03633	0.86	-1.0
4,060,198	+		MIT1002_03633	0.87	-0.1
4,060,222	-		MIT1002_03633	0.88	+0.7
4,060,244	-		MIT1002_03633	0.89	-0.9
4,060,296	-				+0.8
4,060,296	-				+0.8
4,060,410	-				-0.5
4,060,436	-				-1.0
4,060,436	-				+1.2
4,060,535	-				+1.0
4,060,537	+				+1.6
4,060,547	+				-1.3
4,060,555	-				-0.9
4,060,555	-				+0.5
4,060,650	+				-2.5
4,060,655	+				-1.6
4,060,658	-				-0.1
4,060,660	+				-0.3
4,060,660	+				+1.1
4,060,668	-				+0.8
4,060,677	-				-0.5
4,060,731	+				-1.0
4,060,821	+				-0.7
4,060,831	+				+0.6
4,060,885	-		MIT1002_03634	0.19	-1.3
4,061,017	+		MIT1002_03634	0.43	-2.6
4,061,025	-		MIT1002_03634	0.44	+0.7
4,061,025	-		MIT1002_03634	0.44	-1.0
4,061,025	-		MIT1002_03634	0.44	-0.0
4,061,086	+		MIT1002_03634	0.55	+0.2
4,061,094	-		MIT1002_03634	0.57	-0.5
4,061,115	+		MIT1002_03634	0.60	-1.8
4,061,156	-		MIT1002_03634	0.68	+0.3
4,061,158	+		MIT1002_03634	0.68	-2.2
4,061,233	-		MIT1002_03634	0.81	-1.1
4,061,268	-		MIT1002_03634	0.88	+0.9
4,061,268	-		MIT1002_03634	0.88	-0.9
4,061,321	+				+0.8
4,061,321	+				-2.4
4,061,329	-				-0.5
4,061,329	-				+0.5
4,061,432	-				-0.8
4,061,455	-		MIT1002_03635	0.12	-1.0
4,061,500	-		MIT1002_03635	0.17	-0.3
4,061,612	+		MIT1002_03635	0.31	-0.1
4,061,702	+		MIT1002_03635	0.41	-0.4
4,061,712	+		MIT1002_03635	0.43	+0.5
4,061,732	-		MIT1002_03635	0.45	+1.9
4,061,742	+		MIT1002_03635	0.46	+0.3
4,061,742	+		MIT1002_03635	0.46	-0.4
4,061,747	+		MIT1002_03635	0.47	-0.7
4,061,755	-		MIT1002_03635	0.48	-0.1
4,061,803	+		MIT1002_03635	0.54	-0.5
4,061,831	-		MIT1002_03635	0.57	-1.1
4,061,831	-		MIT1002_03635	0.57	-1.8
4,061,855	+		MIT1002_03635	0.60	+1.3
4,061,864	-		MIT1002_03635	0.61	+1.0
4,061,866	-		MIT1002_03635	0.61	-1.2
4,061,900	+		MIT1002_03635	0.65	+0.5
4,061,902	-		MIT1002_03635	0.66	+1.8
4,061,965	+		MIT1002_03635	0.73	-0.5
4,061,966	+		MIT1002_03635	0.73	+1.2
4,061,979	-		MIT1002_03635	0.75	+0.7
4,062,113	-				-1.1
4,062,128	+				+0.2
4,062,148	+				+0.5
4,062,178	+				+2.3
4,062,220	+				-1.5
4,062,300	+				-2.5