Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03607

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5
4,029,656	-		MIT1002_03606	0.64	+0.1
4,029,687	-		MIT1002_03606	0.65	-0.3
4,029,687	-		MIT1002_03606	0.65	+0.4
4,029,720	-		MIT1002_03606	0.66	+0.2
4,029,722	-		MIT1002_03606	0.66	-1.2
4,029,743	-		MIT1002_03606	0.67	+0.5
4,029,882	+		MIT1002_03606	0.73	-2.3
4,029,901	+		MIT1002_03606	0.74	-0.0
4,029,946	+		MIT1002_03606	0.76	+1.6
4,029,954	-		MIT1002_03606	0.76	+0.4
4,029,954	-		MIT1002_03606	0.76	+0.3
4,029,965	-		MIT1002_03606	0.76	-1.1
4,029,995	+		MIT1002_03606	0.78	+0.2
4,030,107	-		MIT1002_03606	0.82	+0.8
4,030,198	+		MIT1002_03606	0.86	-2.3
4,030,334	+				+0.6
4,030,418	+				+1.0
4,030,420	-				-1.9
4,030,525	+				+1.6
4,030,603	-				-0.1
4,030,618	+				-0.1
4,030,676	+				-0.4
4,030,684	-				+1.2
4,030,684	-				-0.3
4,030,684	-				-0.8
4,030,909	-		MIT1002_03607	0.13	-0.7
4,030,950	+		MIT1002_03607	0.15	-0.2
4,030,966	+		MIT1002_03607	0.16	+0.0
4,030,990	-		MIT1002_03607	0.18	-0.6
4,030,995	-		MIT1002_03607	0.18	+0.3
4,031,004	-		MIT1002_03607	0.18	+0.6
4,031,066	+		MIT1002_03607	0.21	+0.7
4,031,073	+		MIT1002_03607	0.22	+1.2
4,031,081	-		MIT1002_03607	0.22	-0.3
4,031,138	-		MIT1002_03607	0.25	+1.5
4,031,138	-		MIT1002_03607	0.25	+0.0
4,031,153	+		MIT1002_03607	0.26	+0.7
4,031,206	-		MIT1002_03607	0.29	+0.4
4,031,266	+		MIT1002_03607	0.32	-1.0
4,031,274	-		MIT1002_03607	0.32	-1.3
4,031,299	-		MIT1002_03607	0.34	-1.5
4,031,324	+		MIT1002_03607	0.35	-0.4
4,031,386	+		MIT1002_03607	0.38	+1.4
4,031,388	+		MIT1002_03607	0.38	-1.2
4,031,388	+		MIT1002_03607	0.38	-0.8
4,031,391	-		MIT1002_03607	0.39	-0.7
4,031,396	-		MIT1002_03607	0.39	-2.9
4,031,425	-		MIT1002_03607	0.40	-0.3
4,031,432	-		MIT1002_03607	0.41	+0.2
4,031,439	+		MIT1002_03607	0.41	-0.3
4,031,447	-		MIT1002_03607	0.41	-0.0
4,031,486	-		MIT1002_03607	0.44	-1.2
4,031,492	+		MIT1002_03607	0.44	-0.7
4,031,500	-		MIT1002_03607	0.44	+0.9
4,031,500	-		MIT1002_03607	0.44	+3.0
4,031,531	+		MIT1002_03607	0.46	+1.0
4,031,534	-		MIT1002_03607	0.46	-1.6
4,031,534	-		MIT1002_03607	0.46	+0.2
4,031,534	-		MIT1002_03607	0.46	+1.0
4,031,539	-		MIT1002_03607	0.46	-0.1
4,031,575	-		MIT1002_03607	0.48	-2.7
4,031,617	+		MIT1002_03607	0.50	+1.1
4,031,685	+		MIT1002_03607	0.54	+0.0
4,031,708	+		MIT1002_03607	0.55	+1.0
4,031,717	-		MIT1002_03607	0.56	+1.5
4,031,790	+		MIT1002_03607	0.59	+1.8
4,031,798	-		MIT1002_03607	0.60	+0.7
4,031,891	+		MIT1002_03607	0.65	+0.7
4,031,917	+		MIT1002_03607	0.66	+0.8
4,031,976	+		MIT1002_03607	0.69	-0.1
4,032,008	+		MIT1002_03607	0.71	-0.7
4,032,036	+		MIT1002_03607	0.72	-1.0
4,032,051	+		MIT1002_03607	0.73	+0.3
4,032,103	+		MIT1002_03607	0.76	-1.0
4,032,103	+		MIT1002_03607	0.76	-1.0
4,032,111	-		MIT1002_03607	0.76	-0.9
4,032,142	-		MIT1002_03607	0.78	-2.8
4,032,150	-		MIT1002_03607	0.78	+0.7
4,032,209	+		MIT1002_03607	0.81	-0.7
4,032,209	+		MIT1002_03607	0.81	-0.9
4,032,217	-		MIT1002_03607	0.82	-0.0
4,032,217	-		MIT1002_03607	0.82	-1.0
4,032,231	+		MIT1002_03607	0.83	+0.0
4,032,253	+		MIT1002_03607	0.84	-0.8
4,032,262	-		MIT1002_03607	0.84	-1.1
4,032,262	-		MIT1002_03607	0.84	-0.2
4,032,289	+		MIT1002_03607	0.86	-0.5
4,032,297	-		MIT1002_03607	0.86	+0.5
4,032,300	-		MIT1002_03607	0.86	-0.5
4,032,304	+		MIT1002_03607	0.86	+0.5
4,032,304	+		MIT1002_03607	0.86	+0.5
4,032,312	-		MIT1002_03607	0.87	-1.8
4,032,314	+		MIT1002_03607	0.87	+1.0
4,032,332	-		MIT1002_03607	0.88	-0.8
4,032,340	+		MIT1002_03607	0.88	-1.3
4,032,340	+		MIT1002_03607	0.88	+1.0
4,032,348	-		MIT1002_03607	0.89	+0.4
4,032,375	+				-0.9
4,032,375	+				-1.0
4,032,382	-				+0.5
4,032,383	-				+0.9
4,032,383	-				+1.5
4,032,414	+				+0.5
4,032,424	+				-0.8
4,032,424	+				-0.2
4,032,432	-				-0.1
4,032,432	-				-0.2
4,032,473	-				+0.5
4,032,473	-				+0.7
4,032,473	-				+2.7
4,032,491	+				+1.2
4,032,504	-				-0.5
4,032,538	-				-0.8
4,032,551	+				+1.6
4,032,551	+				-0.8
4,032,552	-				+1.0
4,032,559	-				-0.4
4,032,559	-				+1.0
4,032,559	-				-1.5
4,032,591	+				-1.2
4,032,592	+				+4.1
4,032,594	-				+0.0
4,032,599	-				+0.8
4,032,600	-				-2.1
4,032,628	-				-0.2
4,032,628	-				+0.2
4,032,668	-				+0.1
4,032,696	+				-0.4
4,032,704	-				+0.8
4,032,710	-				-0.3
4,032,845	-		MIT1002_03608	0.53	+0.5
4,032,845	-		MIT1002_03608	0.53	-1.0
4,032,855	-		MIT1002_03608	0.56	+1.3
4,032,901	+		MIT1002_03608	0.71	-1.9
4,033,127	+		MIT1002_03609	0.65	-1.0
4,033,166	+		MIT1002_03609	0.80	-0.8
4,033,262	+				-0.1
4,033,262	+				-1.6
4,033,309	+				-0.5
4,033,310	-				-0.5
4,033,385	+				+0.5
4,033,395	+				-2.0
4,033,395	+				+0.6
4,033,431	+				+0.0
4,033,439	-				+1.0
4,033,439	-				-1.0
4,033,470	+				+0.3
4,033,470	+				+1.1
4,033,478	-				-0.4
4,033,501	+				+0.7
4,033,526	+				-1.1
4,033,534	-				-0.5