Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03583

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5
4,010,991	+		MIT1002_03582	0.45	-0.7
4,011,023	-		MIT1002_03582	0.48	+0.5
4,011,050	+		MIT1002_03582	0.50	-0.7
4,011,145	-		MIT1002_03582	0.57	+0.5
4,011,149	+		MIT1002_03582	0.57	-1.4
4,011,157	+		MIT1002_03582	0.57	+0.2
4,011,165	-		MIT1002_03582	0.58	-2.2
4,011,301	-		MIT1002_03582	0.68	+0.9
4,011,508	-		MIT1002_03582	0.83	-0.1
4,011,525	+		MIT1002_03582	0.85	-0.4
4,011,526	+		MIT1002_03582	0.85	-0.2
4,011,550	+		MIT1002_03582	0.86	-0.7
4,011,550	+		MIT1002_03582	0.86	+1.6
4,011,613	+				-0.8
4,011,616	-				-0.5
4,011,621	-				+0.0
4,011,664	+				-1.1
4,011,672	-				+0.5
4,011,689	+				-0.4
4,011,689	+				-0.7
4,011,816	+				-0.5
4,011,851	+				+1.0
4,011,960	-				+0.3
4,012,188	+		MIT1002_03583	0.57	+1.6
4,012,196	-		MIT1002_03583	0.59	+0.6
4,012,196	-		MIT1002_03583	0.59	+1.6
4,012,292	-		MIT1002_03583	0.85	-0.0
4,012,294	+		MIT1002_03583	0.85	-0.3
4,012,302	-		MIT1002_03583	0.88	-0.4
4,012,322	+				+0.7
4,012,330	-				+1.5
4,012,330	-				-0.8
4,012,330	-				-0.1
4,012,396	+				-0.3
4,012,404	-				+0.1
4,012,424	-				-1.5