Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03094

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5
3,447,805	-		MIT1002_03092	0.55	-0.5
3,447,810	-		MIT1002_03092	0.56	+2.0
3,447,846	+		MIT1002_03092	0.64	-0.3
3,447,846	-		MIT1002_03092	0.64	-1.1
3,447,864	+		MIT1002_03092	0.68	+0.5
3,447,883	+		MIT1002_03092	0.72	-1.8
3,447,901	+		MIT1002_03092	0.75	+1.5
3,448,023	+				-0.4
3,448,072	+				-0.3
3,448,072	+				-0.8
3,448,080	-				-3.0
3,448,181	-		MIT1002_03093	0.22	+0.4
3,448,290	+		MIT1002_03093	0.36	+1.3
3,448,429	+		MIT1002_03093	0.54	-0.2
3,448,430	+		MIT1002_03093	0.54	-0.2
3,448,430	+		MIT1002_03093	0.54	+1.7
3,448,461	+		MIT1002_03093	0.58	-1.7
3,448,470	-		MIT1002_03093	0.59	-0.3
3,448,493	-		MIT1002_03093	0.62	-1.7
3,448,570	-		MIT1002_03093	0.72	+0.6
3,448,570	-		MIT1002_03093	0.72	-0.2
3,448,570	-		MIT1002_03093	0.72	-1.5
3,448,623	+		MIT1002_03093	0.79	+0.0
3,448,630	+		MIT1002_03093	0.80	-2.0
3,448,631	-		MIT1002_03093	0.80	+3.1
3,448,665	-		MIT1002_03093	0.85	-0.4
3,448,665	-		MIT1002_03093	0.85	-0.2
3,448,716	+				-0.8
3,448,724	-				+0.9
3,448,729	-				+0.4
3,448,744	+				+0.4
3,448,844	-				-0.2
3,448,844	-				-1.6
3,448,865	+				+1.0
3,448,865	+				+0.2
3,448,873	-				-1.8
3,448,873	-				-0.5
3,448,873	-				-0.2
3,448,923	+		MIT1002_03094	0.11	+1.1
3,448,931	-		MIT1002_03094	0.12	+0.7
3,449,025	+		MIT1002_03094	0.21	+0.2
3,449,025	+		MIT1002_03094	0.21	+0.3
3,449,030	+		MIT1002_03094	0.22	-1.0
3,449,030	+		MIT1002_03094	0.22	+0.1
3,449,033	-		MIT1002_03094	0.22	-1.5
3,449,038	-		MIT1002_03094	0.23	-0.3
3,449,038	-		MIT1002_03094	0.23	-0.2
3,449,078	+		MIT1002_03094	0.27	-2.4
3,449,086	-		MIT1002_03094	0.27	-1.9
3,449,086	-		MIT1002_03094	0.27	+0.4
3,449,118	+		MIT1002_03094	0.30	-1.6
3,449,118	+		MIT1002_03094	0.30	-0.3
3,449,118	+		MIT1002_03094	0.30	-0.0
3,449,146	-		MIT1002_03094	0.33	-0.6
3,449,169	+		MIT1002_03094	0.35	+0.5
3,449,174	+		MIT1002_03094	0.36	+1.6
3,449,177	-		MIT1002_03094	0.36	-0.6
3,449,210	-		MIT1002_03094	0.39	+0.1
3,449,210	-		MIT1002_03094	0.39	-0.5
3,449,305	+		MIT1002_03094	0.49	-1.5
3,449,315	+		MIT1002_03094	0.50	-1.8
3,449,315	+		MIT1002_03094	0.50	-0.5
3,449,335	-		MIT1002_03094	0.52	+2.0
3,449,339	-		MIT1002_03094	0.52	-1.3
3,449,374	-		MIT1002_03094	0.55	-0.0
3,449,519	+		MIT1002_03094	0.69	-1.0
3,449,654	+		MIT1002_03094	0.83	+2.2
3,449,703	-		MIT1002_03094	0.87	+2.1
3,449,739	-				-1.5
3,449,744	-				-0.8
3,449,748	+				+1.6
3,449,768	-				+0.7
3,449,774	-				-1.0
3,449,926	-				-0.5
3,449,973	+				-1.3
3,450,037	+		MIT1002_03095	0.25	-0.1
3,450,055	-		MIT1002_03095	0.29	-0.5
3,450,055	-		MIT1002_03095	0.29	-1.4
3,450,162	-		MIT1002_03095	0.56	+1.2
3,450,164	+		MIT1002_03095	0.57	-0.3
3,450,197	-		MIT1002_03095	0.65	+2.5
3,450,222	+		MIT1002_03095	0.71	-1.7
3,450,232	+		MIT1002_03095	0.74	-2.0
3,450,308	-				-2.1
3,450,547	-				-4.4
3,450,601	-				-0.0
3,450,622	-				+0.7
3,450,673	+				-3.0
3,450,673	+				-3.1
3,450,673	+				-3.1
3,450,708	-		MIT1002_03096	0.11	-3.0
3,450,772	+		MIT1002_03096	0.15	+1.0