Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02786

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5
3,089,040	+		MIT1002_02785	0.31	+1.0
3,089,070	-		MIT1002_02785	0.33	+0.6
3,089,123	-		MIT1002_02785	0.37	+1.6
3,089,125	+		MIT1002_02785	0.37	-0.4
3,089,133	+		MIT1002_02785	0.38	+0.6
3,089,178	+		MIT1002_02785	0.42	-0.9
3,089,246	-		MIT1002_02785	0.47	-1.5
3,089,273	-		MIT1002_02785	0.49	-0.7
3,089,299	-		MIT1002_02785	0.51	-1.5
3,089,300	+		MIT1002_02785	0.51	-1.4
3,089,308	+		MIT1002_02785	0.52	-1.2
3,089,354	+		MIT1002_02785	0.56	+1.0
3,089,354	+		MIT1002_02785	0.56	-1.8
3,089,371	+		MIT1002_02785	0.57	+0.6
3,089,457	-		MIT1002_02785	0.64	-0.5
3,089,474	+		MIT1002_02785	0.65	-0.7
3,089,496	+		MIT1002_02785	0.67	-0.4
3,089,557	+		MIT1002_02785	0.72	-1.3
3,089,573	+		MIT1002_02785	0.73	-0.5
3,089,581	-		MIT1002_02785	0.74	-1.6
3,089,674	+		MIT1002_02785	0.81	-1.4
3,089,674	+		MIT1002_02785	0.81	+1.0
3,089,674	+		MIT1002_02785	0.81	-0.9
3,089,676	-		MIT1002_02785	0.81	+0.4
3,089,682	-		MIT1002_02785	0.82	-1.7
3,089,802	+				-0.6
3,089,838	-				-0.5
3,089,840	+				+0.4
3,089,848	-				-0.7
3,089,848	-				-2.1
3,089,932	+				+0.3
3,089,940	-				+0.7
3,089,950	-				-1.8
3,089,951	-				+0.2
3,089,951	-				+0.9
3,090,050	-		MIT1002_02786	0.15	-0.8
3,090,246	+		MIT1002_02786	0.46	+0.4
3,090,254	-		MIT1002_02786	0.48	+1.0
3,090,254	-		MIT1002_02786	0.48	-2.2
3,090,254	-		MIT1002_02786	0.48	+0.2
3,090,254	-		MIT1002_02786	0.48	-1.5
3,090,323	+		MIT1002_02786	0.59	-0.6
3,090,328	+		MIT1002_02786	0.60	-2.5
3,090,383	-		MIT1002_02786	0.68	+0.2
3,090,383	-		MIT1002_02786	0.68	-0.6
3,090,385	-		MIT1002_02786	0.69	-0.7
3,090,468	-		MIT1002_02786	0.82	-1.3
3,090,468	-		MIT1002_02786	0.82	-1.1
3,090,513	+		MIT1002_02786	0.89	-2.3
3,090,521	-				-2.1
3,090,580	-				+2.4
3,090,580	-				+1.3