Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02724

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5
3,025,581	-				+1.4
3,025,606	+				-2.2
3,025,635	-				+0.9
3,025,662	-		MIT1002_02722	0.13	-0.3
3,025,687	-		MIT1002_02722	0.20	+0.7
3,025,753	-		MIT1002_02722	0.36	-1.9
3,025,755	+		MIT1002_02722	0.37	-1.5
3,025,763	+		MIT1002_02722	0.39	-0.1
3,025,815	-		MIT1002_02722	0.52	+0.5
3,025,870	+		MIT1002_02722	0.66	-0.9
3,025,915	+		MIT1002_02722	0.77	-0.6
3,025,923	-		MIT1002_02722	0.79	+1.7
3,026,022	-				-2.1
3,026,024	+				-0.1
3,026,042	+				+1.4
3,026,050	-				+0.4
3,026,050	-				+0.6
3,026,055	-				-1.0
3,026,131	-				+0.3
3,026,141	+				+0.4
3,026,149	-				-2.8
3,026,194	-		MIT1002_02723	0.27	-0.7
3,026,210	+		MIT1002_02723	0.33	+1.0
3,026,444	+				-0.3
3,026,471	+				-0.0
3,026,472	+				-0.7
3,026,662	+				+3.1
3,026,721	-		MIT1002_02724	0.15	-1.5
3,026,767	+		MIT1002_02724	0.19	-1.5
3,026,835	-		MIT1002_02724	0.26	-1.9
3,026,984	-		MIT1002_02724	0.40	+0.2
3,027,011	-		MIT1002_02724	0.43	-2.8
3,027,034	-		MIT1002_02724	0.45	+0.5
3,027,034	-		MIT1002_02724	0.45	-2.9
3,027,196	+		MIT1002_02724	0.60	-0.3
3,027,201	+		MIT1002_02724	0.61	-0.5
3,027,208	+		MIT1002_02724	0.61	-1.6
3,027,283	+		MIT1002_02724	0.69	-1.6
3,027,286	-		MIT1002_02724	0.69	-1.2
3,027,292	+		MIT1002_02724	0.69	+1.7
3,027,294	-		MIT1002_02724	0.70	-0.2
3,027,349	+		MIT1002_02724	0.75	-1.2
3,027,357	-		MIT1002_02724	0.76	-1.3
3,027,365	-		MIT1002_02724	0.76	-0.6
3,027,373	+		MIT1002_02724	0.77	-0.3
3,027,507	+				-0.8
3,027,515	-				+0.0
3,027,548	+				+0.3
3,027,548	+				+1.2
3,027,548	+				+1.6
3,027,548	+				-0.2
3,027,555	-				+0.7
3,027,556	-				+0.2
3,027,556	-				+1.8
3,027,556	-				-0.3
3,027,556	-				+2.0
3,027,558	+				-0.5
3,027,568	+				-0.7
3,027,568	+				+1.3
3,027,576	-				+0.2
3,027,703	+				+0.4
3,027,706	-				-0.3
3,027,727	+		MIT1002_02725	0.12	-0.0
3,027,734	+		MIT1002_02725	0.13	+1.4
3,027,734	+		MIT1002_02725	0.13	+1.8
3,027,734	+		MIT1002_02725	0.13	+0.8
3,027,734	+		MIT1002_02725	0.13	-1.3
3,027,734	+		MIT1002_02725	0.13	-1.9
3,027,742	-		MIT1002_02725	0.15	+1.0
3,027,742	-		MIT1002_02725	0.15	+3.6
3,027,742	-		MIT1002_02725	0.15	+0.7
3,027,742	-		MIT1002_02725	0.15	+0.7
3,027,927	+		MIT1002_02725	0.53	+0.0
3,027,943	+		MIT1002_02725	0.56	+0.2
3,027,960	+		MIT1002_02725	0.59	+1.4
3,027,975	-		MIT1002_02725	0.63	+0.4
3,028,116	+				+0.1
3,028,116	+				+1.0
3,028,118	+				-0.3
3,028,118	+				+0.7
3,028,124	-				+0.6
3,028,124	-				+0.9
3,028,126	+				+1.6
3,028,126	-				+1.9
3,028,126	-				-0.0
3,028,128	+				+0.2
3,028,261	+				-2.5
3,028,294	-		MIT1002_02726	0.16	+0.3
3,028,294	-		MIT1002_02726	0.16	+1.0
3,028,340	-		MIT1002_02726	0.29	-0.3
3,028,360	-		MIT1002_02726	0.35	-2.0
3,028,415	+		MIT1002_02726	0.51	-0.3
3,028,422	+		MIT1002_02726	0.53	+0.1
3,028,430	-		MIT1002_02726	0.56	+1.3
3,028,469	+		MIT1002_02726	0.67	+2.2
3,028,590	-				+0.3
3,028,590	-				+0.5