Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02646

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5
2,941,319	+		MIT1002_02644	0.84	+1.4
2,941,365	+		MIT1002_02644	0.85	-1.3
2,941,365	+		MIT1002_02644	0.85	+1.3
2,941,392	+		MIT1002_02644	0.86	+0.4
2,941,400	-		MIT1002_02644	0.87	+1.6
2,941,426	+		MIT1002_02644	0.88	-0.0
2,941,426	+		MIT1002_02644	0.88	-1.8
2,941,473	+		MIT1002_02644	0.90	+0.4
2,941,508	+				+0.9
2,941,508	+				-1.5
2,941,508	+				+0.7
2,941,508	+				+1.5
2,941,508	+				-0.0
2,941,508	+				+2.0
2,941,508	+				+1.6
2,941,508	+				+0.8
2,941,508	+				+0.5
2,941,516	-				+1.3
2,941,516	-				+2.7
2,941,516	-				+1.2
2,941,516	-				+0.8
2,941,516	-				-0.7
2,941,516	-				-2.4
2,941,516	-				+1.0
2,941,587	+				-0.3
2,941,587	+				+1.0
2,941,587	-				+0.2
2,941,592	+				-2.0
2,941,618	-				+2.3
2,941,637	-				-0.2
2,941,652	+				-1.0
2,941,666	-				-0.1
2,941,719	+				-0.6
2,941,744	+				+0.2
2,941,853	+		MIT1002_02645	0.12	-0.8
2,941,858	+		MIT1002_02645	0.14	-0.0
2,941,866	-		MIT1002_02645	0.18	-0.2
2,941,905	-		MIT1002_02645	0.38	+2.0
2,941,939	+		MIT1002_02645	0.56	-0.7
2,941,963	-		MIT1002_02645	0.68	-0.4
2,942,060	+				+0.7
2,942,068	+				-1.1
2,942,127	+				-0.3
2,942,127	+				+1.2
2,942,127	+				-2.2
2,942,127	+				-0.8
2,942,127	+				+0.5
2,942,135	-				+0.6
2,942,135	-				+1.1
2,942,135	-				-2.0
2,942,135	-				-0.3
2,942,135	-				+0.9
2,942,135	-				+1.5
2,942,157	-				+1.1
2,942,157	-				+0.2
2,942,300	+		MIT1002_02646	0.10	-1.6
2,942,305	+		MIT1002_02646	0.11	-1.1
2,942,307	+		MIT1002_02646	0.12	+0.0
2,942,368	+		MIT1002_02646	0.27	-1.0
2,942,419	+		MIT1002_02646	0.40	-0.5
2,942,434	+		MIT1002_02646	0.44	-0.5
2,942,434	+		MIT1002_02646	0.44	-2.1
2,942,436	-		MIT1002_02646	0.44	-1.0
2,942,437	-		MIT1002_02646	0.45	+0.3
2,942,437	-		MIT1002_02646	0.45	-2.0
2,942,484	+		MIT1002_02646	0.57	-2.2
2,942,505	+		MIT1002_02646	0.62	-1.0
2,942,518	-		MIT1002_02646	0.65	-0.7
2,942,523	-		MIT1002_02646	0.66	+1.2
2,942,524	+		MIT1002_02646	0.67	+1.6
2,942,532	-		MIT1002_02646	0.69	-0.7
2,942,656	+				+0.3
2,942,660	-				-2.6
2,942,670	+				+2.0
2,942,689	+				-0.1
2,942,689	+				+1.7
2,942,689	+				+0.1
2,942,689	+				+0.1
2,942,689	+				+0.4
2,942,689	+				-0.4
2,942,697	-				+0.5
2,942,697	-				-0.6
2,942,697	-				+1.4
2,942,697	-				-1.3
2,942,697	-				+2.2
2,942,701	+				+0.7
2,942,779	+				+0.2
2,943,520	+				-2.0
2,943,521	+				-0.8
2,943,553	-				-4.9