Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02154

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5
2,410,161	-		MIT1002_02153	0.48	+0.4
2,410,173	-		MIT1002_02153	0.48	+0.2
2,410,173	-		MIT1002_02153	0.48	+0.7
2,410,248	+		MIT1002_02153	0.53	+0.2
2,410,364	+		MIT1002_02153	0.59	-1.6
2,410,432	+		MIT1002_02153	0.63	+0.8
2,410,590	+		MIT1002_02153	0.71	+0.5
2,410,590	+		MIT1002_02153	0.71	-2.9
2,410,593	-		MIT1002_02153	0.72	-3.1
2,410,620	+		MIT1002_02153	0.73	-2.4
2,410,628	-		MIT1002_02153	0.73	-0.6
2,410,685	+		MIT1002_02153	0.77	-0.3
2,410,710	+		MIT1002_02153	0.78	-0.9
2,410,730	+		MIT1002_02153	0.79	+1.6
2,410,807	-		MIT1002_02153	0.83	-1.0
2,410,814	-		MIT1002_02153	0.84	+0.0
2,410,814	-		MIT1002_02153	0.84	+0.6
2,410,898	+		MIT1002_02153	0.88	+0.5
2,410,898	+		MIT1002_02153	0.88	-1.9
2,410,906	-		MIT1002_02153	0.89	-0.1
2,410,906	-		MIT1002_02153	0.89	-1.0
2,411,051	+				-0.2
2,411,059	-				-0.4
2,411,114	-				+0.6
2,411,193	-				-1.0
2,411,236	+		MIT1002_02154	0.15	-2.4
2,411,242	+		MIT1002_02154	0.16	-0.4
2,411,400	-		MIT1002_02154	0.40	-4.2
2,411,746	-				-1.4
2,411,809	-				-3.4
2,411,858	+				-3.0
2,411,866	+				+0.1
2,411,866	+				+1.2
2,411,866	+				-2.4
2,411,874	-				+2.3
2,411,874	-				+0.3
2,411,874	-				-0.1
2,412,087	+		MIT1002_02155	0.17	+1.5
2,412,087	+		MIT1002_02155	0.17	-0.3
2,412,095	-		MIT1002_02155	0.18	+0.7
2,412,095	-		MIT1002_02155	0.18	-1.3
2,412,095	-		MIT1002_02155	0.18	+0.4
2,412,097	+		MIT1002_02155	0.18	+1.1
2,412,099	+		MIT1002_02155	0.18	-1.4
2,412,109	-		MIT1002_02155	0.20	+1.0
2,412,140	+		MIT1002_02155	0.24	-2.2
2,412,147	+		MIT1002_02155	0.25	+0.5
2,412,223	+		MIT1002_02155	0.35	-0.6
2,412,223	+		MIT1002_02155	0.35	-0.4
2,412,227	-		MIT1002_02155	0.36	+1.0
2,412,307	+		MIT1002_02155	0.47	-0.2
2,412,310	-		MIT1002_02155	0.47	-0.2
2,412,379	-		MIT1002_02155	0.57	-0.0
2,412,387	-		MIT1002_02155	0.58	+0.1
2,412,396	+		MIT1002_02155	0.59	+0.8
2,412,402	+		MIT1002_02155	0.60	-1.0
2,412,403	-		MIT1002_02155	0.60	+0.2
2,412,403	-		MIT1002_02155	0.60	+0.2
2,412,423	-		MIT1002_02155	0.63	-1.4
2,412,525	-		MIT1002_02155	0.77	+0.0
2,412,538	+		MIT1002_02155	0.79	+0.4
2,412,606	+		MIT1002_02155	0.88	+0.8
2,412,729	+				+0.4
2,412,731	+				-0.4
2,412,739	-				-1.4
2,412,739	-				-0.2
2,412,745	+				-0.0
2,412,753	-				-0.7
2,412,753	-				-2.4