Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01957

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5
2,182,490	-		MIT1002_01956	0.82	+1.6
2,182,579	-				-0.6
2,182,701	+				-0.2
2,182,701	+				-2.5
2,182,701	+				+0.0
2,182,709	-				-0.1
2,182,709	-				-0.6
2,182,831	+				+1.5
2,182,831	+				+1.5
2,182,882	+				+0.2
2,182,895	+				-1.1
2,183,039	-				+3.1
2,183,046	+				-0.2
2,183,206	+				+1.5
2,183,236	-				-1.0
2,183,281	+				+1.0
2,183,296	-				+0.8
2,183,309	+				+0.4
2,183,339	+				-0.0
2,183,344	+				-0.3
2,183,344	+				+0.3
2,183,352	-				-1.2
2,183,352	-				+0.2
2,183,352	-				-1.0
2,183,352	-				-0.6
2,183,482	-		MIT1002_01957	0.10	-1.8
2,183,482	-		MIT1002_01957	0.10	-0.1
2,183,498	+		MIT1002_01957	0.14	-1.0
2,183,506	-		MIT1002_01957	0.15	-0.4
2,183,527	+		MIT1002_01957	0.20	-0.7
2,183,609	+		MIT1002_01957	0.36	-2.6
2,183,633	-		MIT1002_01957	0.41	-0.6
2,183,635	+		MIT1002_01957	0.42	-0.6
2,183,648	+		MIT1002_01957	0.44	+1.2
2,183,666	+		MIT1002_01957	0.48	+0.8
2,183,666	-		MIT1002_01957	0.48	+1.2
2,183,666	-		MIT1002_01957	0.48	-0.3
2,183,666	-		MIT1002_01957	0.48	-0.9
2,183,674	-		MIT1002_01957	0.50	-0.8
2,183,674	-		MIT1002_01957	0.50	-0.1
2,183,674	-		MIT1002_01957	0.50	+0.5
2,183,720	+		MIT1002_01957	0.59	+0.7
2,183,720	+		MIT1002_01957	0.59	+0.3
2,183,720	+		MIT1002_01957	0.59	+0.6
2,183,720	+		MIT1002_01957	0.59	-0.4
2,183,728	-		MIT1002_01957	0.61	-0.9
2,183,835	-		MIT1002_01957	0.83	+1.3
2,183,849	-		MIT1002_01957	0.85	-2.0
2,184,041	-				+0.7
2,184,068	-				+0.4
2,184,101	-		MIT1002_01958	0.10	-0.3
2,184,101	-		MIT1002_01958	0.10	-2.0
2,184,101	-		MIT1002_01958	0.10	+0.6
2,184,318	+		MIT1002_01958	0.34	+0.7
2,184,337	-		MIT1002_01958	0.36	-1.3
2,184,342	-		MIT1002_01958	0.37	+0.5
2,184,399	+		MIT1002_01958	0.43	+0.9
2,184,555	+		MIT1002_01958	0.60	-1.2
2,184,594	+		MIT1002_01958	0.65	+0.8
2,184,594	+		MIT1002_01958	0.65	+1.6
2,184,596	+		MIT1002_01958	0.65	+0.6
2,184,630	-		MIT1002_01958	0.69	-3.6
2,184,738	-		MIT1002_01958	0.81	-0.3
2,184,770	-		MIT1002_01958	0.84	+0.7
2,184,797	-		MIT1002_01958	0.87	-1.0
2,184,818	-		MIT1002_01958	0.90	-0.4
2,184,820	+		MIT1002_01958	0.90	+0.1
2,184,859	+				+1.1
2,184,866	+				-0.4
2,184,874	-				+0.8
2,184,878	+				-0.1
2,184,886	-				+1.0
2,184,907	+				-0.2
2,184,907	+				-1.8