Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01296

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5
1,435,134	-		MIT1002_01295	0.38	-1.8
1,435,147	-		MIT1002_01295	0.40	-1.5
1,435,194	+		MIT1002_01295	0.46	-2.1
1,435,284	+		MIT1002_01295	0.57	-1.8
1,435,296	+		MIT1002_01295	0.58	-2.5
1,435,296	+		MIT1002_01295	0.58	-2.4
1,435,304	-		MIT1002_01295	0.59	-0.5
1,435,318	+		MIT1002_01295	0.61	-2.3
1,435,318	+		MIT1002_01295	0.61	-0.9
1,435,406	+		MIT1002_01295	0.72	+0.6
1,435,416	+		MIT1002_01295	0.74	-1.4
1,435,450	-		MIT1002_01295	0.78	-3.5
1,435,469	-		MIT1002_01295	0.80	-1.2
1,435,549	-				-0.9
1,435,549	-				-3.1
1,435,592	-				-2.3
1,435,597	-				+0.1
1,435,597	-				-3.3
1,435,635	+				-3.0
1,435,635	+				+0.4
1,435,744	+				+1.2
1,435,744	+				+0.9
1,435,752	-				-1.0
1,437,274	+				-3.1
1,437,357	+				+1.6
1,437,365	-				-0.2
1,437,365	-				+0.3
1,437,481	-				+1.1
1,437,488	+				-0.1
1,437,491	-				+0.9
1,437,626	-				-1.7
1,437,648	-				+1.1
1,437,680	+				+1.4
1,437,698	+				-1.2
1,437,711	-				+1.1
1,437,718	-				+0.3
1,437,742	-				-1.0
1,437,816	+		MIT1002_01297	0.13	+0.4
1,437,822	-		MIT1002_01297	0.13	-0.3
1,437,824	-		MIT1002_01297	0.13	+0.4
1,437,860	-		MIT1002_01297	0.15	+0.7
1,437,860	-		MIT1002_01297	0.15	+1.7
1,437,889	-		MIT1002_01297	0.16	+1.2
1,437,934	+		MIT1002_01297	0.19	-0.9
1,437,939	+		MIT1002_01297	0.19	-1.6
1,437,944	+		MIT1002_01297	0.19	-0.1
1,437,946	+		MIT1002_01297	0.19	+1.2
1,437,947	-		MIT1002_01297	0.19	-2.1
1,437,997	-		MIT1002_01297	0.22	+0.8
1,437,998	-		MIT1002_01297	0.22	-0.6
1,438,041	+		MIT1002_01297	0.24	+0.4
1,438,043	+		MIT1002_01297	0.24	-1.1
1,438,049	-		MIT1002_01297	0.24	-0.8
1,438,084	-		MIT1002_01297	0.26	-0.4
1,438,088	-		MIT1002_01297	0.26	+0.7
1,438,088	-		MIT1002_01297	0.26	+3.2
1,438,110	+		MIT1002_01297	0.27	-0.9
1,438,187	+		MIT1002_01297	0.31	+1.4
1,438,226	+		MIT1002_01297	0.33	-0.9
1,438,241	-		MIT1002_01297	0.33	+0.9
1,438,241	-		MIT1002_01297	0.33	+1.1
1,438,241	-		MIT1002_01297	0.33	-0.9
1,438,309	-		MIT1002_01297	0.37	+0.4
1,438,314	-		MIT1002_01297	0.37	-0.5
1,438,323	+		MIT1002_01297	0.37	-1.3