Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01144

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5
1,255,859	-				+1.0
1,255,928	+				-2.8
1,255,936	-				+0.2
1,255,936	-				-1.3
1,255,958	+				-2.6
1,255,995	-				-2.4
1,256,014	-				-2.7
1,256,156	-		MIT1002_01143	0.18	-2.1
1,256,232	+		MIT1002_01143	0.29	-0.7
1,256,343	-		MIT1002_01143	0.45	-2.1
1,256,343	-		MIT1002_01143	0.45	-2.7
1,256,414	-		MIT1002_01143	0.55	-2.4
1,256,474	+		MIT1002_01143	0.64	-1.2
1,256,502	+		MIT1002_01143	0.68	+0.7
1,256,510	-		MIT1002_01143	0.69	-2.0
1,256,577	+		MIT1002_01143	0.79	-0.9
1,256,655	-				-1.9
1,256,727	+				+0.7
1,256,744	-				+1.7
1,256,744	-				-0.0
1,256,830	+		MIT1002_01144	0.15	+0.8
1,256,862	-		MIT1002_01144	0.28	+1.6
1,256,869	+		MIT1002_01144	0.31	+2.0
1,256,882	-		MIT1002_01144	0.37	+2.1
1,256,920	-		MIT1002_01144	0.53	+0.5
1,256,922	+		MIT1002_01144	0.53	+1.8
1,256,981	-		MIT1002_01144	0.78	+3.2
1,256,992	+		MIT1002_01144	0.82	+1.5
1,257,000	-		MIT1002_01144	0.86	-0.3
1,257,018	+				+1.6
1,257,018	-				+0.7
1,257,158	-		MIT1002_01145	0.29	+0.8
1,257,178	+		MIT1002_01145	0.33	-0.6
1,257,198	+		MIT1002_01145	0.38	+1.4
1,257,267	+		MIT1002_01145	0.53	+0.4
1,257,307	-		MIT1002_01145	0.62	+1.0
1,257,424	+		MIT1002_01145	0.88	+1.7
1,257,491	-				+0.1
1,257,511	-				+1.9
1,257,598	+				-0.8
1,257,604	+				-1.5
1,257,604	+				+0.5
1,257,604	+				-0.8
1,257,612	-				-0.5
1,257,762	+		MIT1002_01146	0.10	-1.3
1,257,828	+		MIT1002_01146	0.18	-0.7
1,257,828	+		MIT1002_01146	0.18	+0.2
1,257,828	+		MIT1002_01146	0.18	-0.3
1,257,917	+		MIT1002_01146	0.30	+0.7
1,257,923	-		MIT1002_01146	0.30	-3.5
1,257,923	-		MIT1002_01146	0.30	-1.0