Experiment: LB_noSalt with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS37630 and QEN71_RS37635 overlap by 4 nucleotides QEN71_RS37635 and QEN71_RS37640 overlap by 43 nucleotides QEN71_RS37640 and QEN71_RS37645 are separated by 108 nucleotides QEN71_RS37645 and QEN71_RS37650 are separated by 75 nucleotides
QEN71_RS37630: QEN71_RS37630 - DUF692 domain-containing protein, at 1,811,127 to 1,812,005
_RS37630
QEN71_RS37635: QEN71_RS37635 - DNA-binding domain-containing protein, at 1,812,002 to 1,812,754
_RS37635
QEN71_RS37640: QEN71_RS37640 - tautomerase family protein, at 1,812,712 to 1,812,861
_RS37640
QEN71_RS37645: QEN71_RS37645 - organic hydroperoxide resistance protein, at 1,812,970 to 1,813,395
_RS37645
QEN71_RS37650: QEN71_RS37650 - hypothetical protein, at 1,813,471 to 1,813,668
_RS37650
Position (kb)
1812
1813 Strain fitness (log2 ratio)
-1
0
1 at 1811.827 kb on - strand, within QEN71_RS37630 at 1811.943 kb on + strand at 1812.035 kb on - strand at 1812.120 kb on - strand, within QEN71_RS37635 at 1812.120 kb on - strand, within QEN71_RS37635 at 1812.120 kb on - strand, within QEN71_RS37635 at 1812.120 kb on - strand, within QEN71_RS37635 at 1812.120 kb on - strand, within QEN71_RS37635 at 1812.120 kb on - strand, within QEN71_RS37635 at 1812.309 kb on + strand, within QEN71_RS37635 at 1812.310 kb on - strand, within QEN71_RS37635 at 1812.642 kb on + strand, within QEN71_RS37635 at 1812.731 kb on - strand at 1812.731 kb on - strand at 1812.731 kb on - strand at 1812.945 kb on + strand at 1812.945 kb on + strand at 1812.946 kb on - strand at 1812.946 kb on - strand at 1812.946 kb on - strand at 1813.406 kb on + strand at 1813.434 kb on + strand at 1813.435 kb on - strand at 1813.446 kb on + strand at 1813.447 kb on - strand at 1813.449 kb on + strand at 1813.486 kb on - strand at 1813.684 kb on - strand at 1813.708 kb on - strand at 1813.772 kb on + strand at 1813.773 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Cobalt chloride 0.25 mM remove 1,811,827 - QEN71_RS37630 0.80 -0.5 1,811,943 + +0.1 1,812,035 - +0.0 1,812,120 - QEN71_RS37635 0.16 +0.1 1,812,120 - QEN71_RS37635 0.16 -0.4 1,812,120 - QEN71_RS37635 0.16 -1.3 1,812,120 - QEN71_RS37635 0.16 -1.5 1,812,120 - QEN71_RS37635 0.16 -0.0 1,812,120 - QEN71_RS37635 0.16 +0.7 1,812,309 + QEN71_RS37635 0.41 +1.1 1,812,310 - QEN71_RS37635 0.41 -0.4 1,812,642 + QEN71_RS37635 0.85 -0.3 1,812,731 - +0.6 1,812,731 - -0.7 1,812,731 - -0.0 1,812,945 + +0.8 1,812,945 + +0.3 1,812,946 - +1.0 1,812,946 - -0.1 1,812,946 - -0.2 1,813,406 + -1.1 1,813,434 + +0.1 1,813,435 - -1.1 1,813,446 + +0.2 1,813,447 - -0.2 1,813,449 + -0.2 1,813,486 - -0.9 1,813,684 - -1.5 1,813,708 - -0.2 1,813,772 + -0.6 1,813,773 - -0.3
Or see this region's nucleotide sequence