Experiment: LB_noSalt with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS37365 and QEN71_RS37370 are separated by 585 nucleotides QEN71_RS37370 and QEN71_RS37375 are separated by 89 nucleotides
QEN71_RS37365: QEN71_RS37365 - hypothetical protein, at 1,751,286 to 1,752,194
_RS37365
QEN71_RS37370: QEN71_RS37370 - alginate export family protein, at 1,752,780 to 1,754,159
_RS37370
QEN71_RS37375: QEN71_RS37375 - glyoxalase, at 1,754,249 to 1,755,184
_RS37375
Position (kb)
1752
1753
1754
1755 Strain fitness (log2 ratio)
-1
0
1
2 at 1751.899 kb on - strand, within QEN71_RS37365 at 1751.899 kb on - strand, within QEN71_RS37365 at 1751.899 kb on - strand, within QEN71_RS37365 at 1752.084 kb on + strand, within QEN71_RS37365 at 1752.084 kb on + strand, within QEN71_RS37365 at 1752.192 kb on + strand at 1752.206 kb on - strand at 1752.339 kb on + strand at 1752.339 kb on + strand at 1752.371 kb on + strand at 1752.371 kb on + strand at 1752.372 kb on - strand at 1752.372 kb on - strand at 1752.372 kb on - strand at 1752.372 kb on - strand at 1752.372 kb on - strand at 1752.411 kb on - strand at 1752.411 kb on - strand at 1752.497 kb on + strand at 1752.498 kb on - strand at 1752.557 kb on + strand at 1752.558 kb on - strand at 1752.604 kb on + strand at 1752.647 kb on - strand at 1752.647 kb on - strand at 1752.652 kb on - strand at 1752.674 kb on + strand at 1752.675 kb on - strand at 1752.715 kb on - strand at 1752.715 kb on - strand at 1752.925 kb on + strand, within QEN71_RS37370 at 1752.988 kb on + strand, within QEN71_RS37370 at 1752.988 kb on + strand, within QEN71_RS37370 at 1752.992 kb on + strand, within QEN71_RS37370 at 1753.005 kb on - strand, within QEN71_RS37370 at 1753.005 kb on - strand, within QEN71_RS37370 at 1753.008 kb on - strand, within QEN71_RS37370 at 1753.061 kb on + strand, within QEN71_RS37370 at 1753.097 kb on + strand, within QEN71_RS37370 at 1753.126 kb on + strand, within QEN71_RS37370 at 1753.130 kb on - strand, within QEN71_RS37370 at 1753.426 kb on + strand, within QEN71_RS37370 at 1753.426 kb on + strand, within QEN71_RS37370 at 1753.427 kb on - strand, within QEN71_RS37370 at 1753.427 kb on - strand, within QEN71_RS37370 at 1753.512 kb on + strand, within QEN71_RS37370 at 1753.512 kb on + strand, within QEN71_RS37370 at 1753.513 kb on - strand, within QEN71_RS37370 at 1753.513 kb on - strand, within QEN71_RS37370 at 1753.561 kb on + strand, within QEN71_RS37370 at 1753.880 kb on - strand, within QEN71_RS37370 at 1753.967 kb on - strand, within QEN71_RS37370 at 1753.996 kb on + strand, within QEN71_RS37370 at 1753.996 kb on + strand, within QEN71_RS37370 at 1753.996 kb on + strand, within QEN71_RS37370 at 1753.997 kb on - strand, within QEN71_RS37370 at 1754.099 kb on + strand at 1754.281 kb on - strand at 1754.549 kb on + strand, within QEN71_RS37375 at 1754.616 kb on + strand, within QEN71_RS37375 at 1754.616 kb on + strand, within QEN71_RS37375 at 1754.617 kb on - strand, within QEN71_RS37375 at 1754.669 kb on - strand, within QEN71_RS37375 at 1754.669 kb on - strand, within QEN71_RS37375 at 1754.686 kb on + strand, within QEN71_RS37375 at 1754.687 kb on - strand, within QEN71_RS37375 at 1754.687 kb on - strand, within QEN71_RS37375 at 1754.688 kb on + strand, within QEN71_RS37375 at 1754.689 kb on - strand, within QEN71_RS37375 at 1754.689 kb on - strand, within QEN71_RS37375 at 1754.689 kb on - strand, within QEN71_RS37375 at 1754.744 kb on - strand, within QEN71_RS37375 at 1754.744 kb on - strand, within QEN71_RS37375 at 1754.895 kb on + strand, within QEN71_RS37375 at 1755.015 kb on + strand, within QEN71_RS37375 at 1755.016 kb on - strand, within QEN71_RS37375 at 1755.016 kb on - strand, within QEN71_RS37375 at 1755.016 kb on - strand, within QEN71_RS37375 at 1755.034 kb on - strand, within QEN71_RS37375 at 1755.034 kb on - strand, within QEN71_RS37375 at 1755.141 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Cobalt chloride 0.25 mM remove 1,751,899 - QEN71_RS37365 0.67 +0.2 1,751,899 - QEN71_RS37365 0.67 -1.0 1,751,899 - QEN71_RS37365 0.67 +0.2 1,752,084 + QEN71_RS37365 0.88 -0.1 1,752,084 + QEN71_RS37365 0.88 +0.3 1,752,192 + -0.7 1,752,206 - -0.6 1,752,339 + -0.7 1,752,339 + -0.4 1,752,371 + -0.5 1,752,371 + -1.1 1,752,372 - -0.1 1,752,372 - +0.5 1,752,372 - -0.1 1,752,372 - -0.5 1,752,372 - +1.7 1,752,411 - -1.2 1,752,411 - +0.3 1,752,497 + -0.3 1,752,498 - -1.3 1,752,557 + -0.8 1,752,558 - -0.3 1,752,604 + -0.8 1,752,647 - -0.5 1,752,647 - -0.9 1,752,652 - -0.1 1,752,674 + -0.4 1,752,675 - -0.1 1,752,715 - -0.5 1,752,715 - -0.4 1,752,925 + QEN71_RS37370 0.11 -0.6 1,752,988 + QEN71_RS37370 0.15 -1.1 1,752,988 + QEN71_RS37370 0.15 +0.5 1,752,992 + QEN71_RS37370 0.15 -0.3 1,753,005 - QEN71_RS37370 0.16 -0.3 1,753,005 - QEN71_RS37370 0.16 +0.4 1,753,008 - QEN71_RS37370 0.17 +0.4 1,753,061 + QEN71_RS37370 0.20 +0.3 1,753,097 + QEN71_RS37370 0.23 +0.4 1,753,126 + QEN71_RS37370 0.25 -0.9 1,753,130 - QEN71_RS37370 0.25 +0.4 1,753,426 + QEN71_RS37370 0.47 +0.9 1,753,426 + QEN71_RS37370 0.47 +0.0 1,753,427 - QEN71_RS37370 0.47 -0.9 1,753,427 - QEN71_RS37370 0.47 -0.8 1,753,512 + QEN71_RS37370 0.53 +2.0 1,753,512 + QEN71_RS37370 0.53 +1.0 1,753,513 - QEN71_RS37370 0.53 +0.3 1,753,513 - QEN71_RS37370 0.53 +0.4 1,753,561 + QEN71_RS37370 0.57 -0.9 1,753,880 - QEN71_RS37370 0.80 -0.7 1,753,967 - QEN71_RS37370 0.86 +1.3 1,753,996 + QEN71_RS37370 0.88 -0.3 1,753,996 + QEN71_RS37370 0.88 +0.3 1,753,996 + QEN71_RS37370 0.88 -0.2 1,753,997 - QEN71_RS37370 0.88 +0.9 1,754,099 + +1.4 1,754,281 - -1.1 1,754,549 + QEN71_RS37375 0.32 -0.6 1,754,616 + QEN71_RS37375 0.39 -0.5 1,754,616 + QEN71_RS37375 0.39 +0.4 1,754,617 - QEN71_RS37375 0.39 +0.1 1,754,669 - QEN71_RS37375 0.45 +0.8 1,754,669 - QEN71_RS37375 0.45 +1.3 1,754,686 + QEN71_RS37375 0.47 -0.0 1,754,687 - QEN71_RS37375 0.47 +0.3 1,754,687 - QEN71_RS37375 0.47 -0.4 1,754,688 + QEN71_RS37375 0.47 +0.1 1,754,689 - QEN71_RS37375 0.47 +0.4 1,754,689 - QEN71_RS37375 0.47 -0.1 1,754,689 - QEN71_RS37375 0.47 -0.2 1,754,744 - QEN71_RS37375 0.53 -0.6 1,754,744 - QEN71_RS37375 0.53 +1.2 1,754,895 + QEN71_RS37375 0.69 -0.2 1,755,015 + QEN71_RS37375 0.82 +0.0 1,755,016 - QEN71_RS37375 0.82 -0.8 1,755,016 - QEN71_RS37375 0.82 -0.3 1,755,016 - QEN71_RS37375 0.82 -0.6 1,755,034 - QEN71_RS37375 0.84 -0.3 1,755,034 - QEN71_RS37375 0.84 +0.0 1,755,141 - +0.7
Or see this region's nucleotide sequence