Experiment: LB_noSalt with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS33050 and QEN71_RS33055 are separated by 66 nucleotides QEN71_RS33055 and QEN71_RS33060 overlap by 32 nucleotides QEN71_RS33060 and QEN71_RS33065 are separated by 104 nucleotides QEN71_RS33065 and QEN71_RS33070 are separated by 83 nucleotides
QEN71_RS33050: QEN71_RS33050 - BamA/TamA family outer membrane protein, at 744,757 to 745,908
_RS33050
QEN71_RS33055: QEN71_RS33055 - MipA/OmpV family protein, at 745,975 to 746,781
_RS33055
QEN71_RS33060: QEN71_RS33060 - RT0821/Lpp0805 family surface protein, at 746,750 to 747,217
_RS33060
QEN71_RS33065: QEN71_RS33065 - hypothetical protein, at 747,322 to 747,912
_RS33065
QEN71_RS33070: QEN71_RS33070 - YMGG-like glycine zipper-containing protein, at 747,996 to 748,472
_RS33070
Position (kb) 746
747
748 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 745.879 kb on + strand at 745.879 kb on + strand at 745.880 kb on - strand at 745.880 kb on - strand at 745.880 kb on - strand at 745.882 kb on - strand at 745.953 kb on - strand at 745.995 kb on + strand at 746.108 kb on - strand, within QEN71_RS33055 at 746.155 kb on + strand, within QEN71_RS33055 at 746.155 kb on + strand, within QEN71_RS33055 at 746.188 kb on + strand, within QEN71_RS33055 at 746.188 kb on + strand, within QEN71_RS33055 at 746.188 kb on + strand, within QEN71_RS33055 at 746.188 kb on + strand, within QEN71_RS33055 at 746.197 kb on + strand, within QEN71_RS33055 at 746.198 kb on - strand, within QEN71_RS33055 at 746.300 kb on + strand, within QEN71_RS33055 at 746.300 kb on + strand, within QEN71_RS33055 at 746.300 kb on + strand, within QEN71_RS33055 at 746.305 kb on - strand, within QEN71_RS33055 at 746.313 kb on + strand, within QEN71_RS33055 at 746.314 kb on - strand, within QEN71_RS33055 at 746.340 kb on - strand, within QEN71_RS33055 at 746.350 kb on + strand, within QEN71_RS33055 at 746.350 kb on + strand, within QEN71_RS33055 at 746.350 kb on + strand, within QEN71_RS33055 at 746.351 kb on - strand, within QEN71_RS33055 at 746.351 kb on - strand, within QEN71_RS33055 at 746.353 kb on - strand, within QEN71_RS33055 at 746.422 kb on + strand, within QEN71_RS33055 at 746.536 kb on + strand, within QEN71_RS33055 at 746.536 kb on + strand, within QEN71_RS33055 at 746.636 kb on - strand, within QEN71_RS33055 at 746.675 kb on - strand, within QEN71_RS33055 at 746.678 kb on - strand, within QEN71_RS33055 at 746.749 kb on + strand at 746.874 kb on + strand, within QEN71_RS33060 at 746.945 kb on + strand, within QEN71_RS33060 at 746.945 kb on + strand, within QEN71_RS33060 at 746.945 kb on + strand, within QEN71_RS33060 at 746.945 kb on + strand, within QEN71_RS33060 at 746.945 kb on + strand, within QEN71_RS33060 at 746.946 kb on - strand, within QEN71_RS33060 at 747.245 kb on + strand at 747.246 kb on - strand at 747.272 kb on - strand at 747.272 kb on - strand at 747.279 kb on + strand at 747.310 kb on + strand at 747.311 kb on - strand at 747.384 kb on + strand, within QEN71_RS33065 at 747.385 kb on - strand, within QEN71_RS33065 at 747.487 kb on + strand, within QEN71_RS33065 at 747.682 kb on + strand, within QEN71_RS33065 at 747.756 kb on + strand, within QEN71_RS33065 at 747.760 kb on + strand, within QEN71_RS33065 at 747.761 kb on - strand, within QEN71_RS33065 at 747.761 kb on - strand, within QEN71_RS33065 at 747.761 kb on - strand, within QEN71_RS33065 at 747.761 kb on - strand, within QEN71_RS33065 at 747.767 kb on + strand, within QEN71_RS33065 at 747.768 kb on - strand, within QEN71_RS33065 at 747.932 kb on - strand at 747.932 kb on - strand at 747.934 kb on + strand at 747.935 kb on - strand at 747.958 kb on - strand at 748.003 kb on + strand at 748.004 kb on - strand at 748.048 kb on + strand, within QEN71_RS33070 at 748.049 kb on - strand, within QEN71_RS33070
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Cobalt chloride 0.25 mM remove 745,879 + -0.4 745,879 + +0.6 745,880 - +0.9 745,880 - +0.5 745,880 - +0.9 745,882 - -1.1 745,953 - -0.1 745,995 + -0.7 746,108 - QEN71_RS33055 0.16 -1.9 746,155 + QEN71_RS33055 0.22 -0.1 746,155 + QEN71_RS33055 0.22 -0.5 746,188 + QEN71_RS33055 0.26 +0.9 746,188 + QEN71_RS33055 0.26 -0.5 746,188 + QEN71_RS33055 0.26 -0.7 746,188 + QEN71_RS33055 0.26 +0.6 746,197 + QEN71_RS33055 0.28 +0.9 746,198 - QEN71_RS33055 0.28 -0.8 746,300 + QEN71_RS33055 0.40 -1.1 746,300 + QEN71_RS33055 0.40 -0.5 746,300 + QEN71_RS33055 0.40 +0.6 746,305 - QEN71_RS33055 0.41 +0.2 746,313 + QEN71_RS33055 0.42 +1.6 746,314 - QEN71_RS33055 0.42 +0.4 746,340 - QEN71_RS33055 0.45 -0.6 746,350 + QEN71_RS33055 0.46 -0.6 746,350 + QEN71_RS33055 0.46 -0.9 746,350 + QEN71_RS33055 0.46 -0.3 746,351 - QEN71_RS33055 0.47 -1.2 746,351 - QEN71_RS33055 0.47 -1.5 746,353 - QEN71_RS33055 0.47 +0.5 746,422 + QEN71_RS33055 0.55 -1.1 746,536 + QEN71_RS33055 0.70 -0.5 746,536 + QEN71_RS33055 0.70 -0.1 746,636 - QEN71_RS33055 0.82 -0.9 746,675 - QEN71_RS33055 0.87 -0.0 746,678 - QEN71_RS33055 0.87 -0.1 746,749 + +0.1 746,874 + QEN71_RS33060 0.26 -0.6 746,945 + QEN71_RS33060 0.42 -1.6 746,945 + QEN71_RS33060 0.42 -0.2 746,945 + QEN71_RS33060 0.42 +0.2 746,945 + QEN71_RS33060 0.42 -1.4 746,945 + QEN71_RS33060 0.42 -0.6 746,946 - QEN71_RS33060 0.42 -0.3 747,245 + +0.6 747,246 - -0.4 747,272 - -0.8 747,272 - +1.0 747,279 + -2.9 747,310 + -1.4 747,311 - +0.2 747,384 + QEN71_RS33065 0.10 -0.1 747,385 - QEN71_RS33065 0.11 -1.1 747,487 + QEN71_RS33065 0.28 -1.1 747,682 + QEN71_RS33065 0.61 +0.6 747,756 + QEN71_RS33065 0.73 -0.6 747,760 + QEN71_RS33065 0.74 +0.2 747,761 - QEN71_RS33065 0.74 -0.1 747,761 - QEN71_RS33065 0.74 -0.0 747,761 - QEN71_RS33065 0.74 -0.6 747,761 - QEN71_RS33065 0.74 +0.8 747,767 + QEN71_RS33065 0.75 -0.4 747,768 - QEN71_RS33065 0.75 -0.7 747,932 - -1.4 747,932 - -2.3 747,934 + +0.2 747,935 - -1.7 747,958 - -0.6 748,003 + -0.3 748,004 - +0.1 748,048 + QEN71_RS33070 0.11 -2.2 748,049 - QEN71_RS33070 0.11 -0.6
Or see this region's nucleotide sequence