Experiment: LB_noSalt with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS12790 and QEN71_RS12795 are separated by 34 nucleotides QEN71_RS12795 and QEN71_RS12800 are separated by 187 nucleotides QEN71_RS12800 and QEN71_RS12805 are separated by 385 nucleotides QEN71_RS12805 and QEN71_RS12810 are separated by 12 nucleotides
QEN71_RS12790: QEN71_RS12790 - SDR family oxidoreductase, at 2,861,354 to 2,862,076
_RS12790
QEN71_RS12795: QEN71_RS12795 - hypothetical protein, at 2,862,111 to 2,862,467
_RS12795
QEN71_RS12800: QEN71_RS12800 - acyltransferase, at 2,862,655 to 2,863,884
_RS12800
QEN71_RS12805: QEN71_RS12805 - DUF308 domain-containing protein, at 2,864,270 to 2,864,848
_RS12805
QEN71_RS12810: QEN71_RS12810 - hypothetical protein, at 2,864,861 to 2,865,250
_RS12810
Position (kb)
2862
2863
2864 Strain fitness (log2 ratio)
-2
-1
0
1 at 2861.892 kb on + strand, within QEN71_RS12790 at 2861.894 kb on + strand, within QEN71_RS12790 at 2861.894 kb on + strand, within QEN71_RS12790 at 2862.271 kb on + strand, within QEN71_RS12795 at 2862.272 kb on - strand, within QEN71_RS12795 at 2862.448 kb on + strand at 2862.448 kb on + strand at 2862.448 kb on + strand at 2862.448 kb on + strand at 2862.450 kb on + strand at 2862.483 kb on + strand at 2862.645 kb on - strand at 2862.645 kb on - strand at 2862.756 kb on - strand at 2862.786 kb on - strand, within QEN71_RS12800 at 2862.817 kb on - strand, within QEN71_RS12800 at 2863.162 kb on - strand, within QEN71_RS12800 at 2863.197 kb on - strand, within QEN71_RS12800 at 2863.197 kb on - strand, within QEN71_RS12800 at 2863.274 kb on + strand, within QEN71_RS12800 at 2863.275 kb on - strand, within QEN71_RS12800 at 2863.313 kb on + strand, within QEN71_RS12800 at 2863.313 kb on + strand, within QEN71_RS12800 at 2863.313 kb on + strand, within QEN71_RS12800 at 2863.446 kb on - strand, within QEN71_RS12800 at 2863.474 kb on + strand, within QEN71_RS12800 at 2863.475 kb on - strand, within QEN71_RS12800 at 2863.475 kb on - strand, within QEN71_RS12800 at 2863.631 kb on + strand, within QEN71_RS12800 at 2864.177 kb on - strand at 2864.331 kb on - strand, within QEN71_RS12805 at 2864.780 kb on + strand, within QEN71_RS12805
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Cobalt chloride 0.25 mM remove 2,861,892 + QEN71_RS12790 0.74 +0.1 2,861,894 + QEN71_RS12790 0.75 +0.1 2,861,894 + QEN71_RS12790 0.75 -0.8 2,862,271 + QEN71_RS12795 0.45 -1.1 2,862,272 - QEN71_RS12795 0.45 -0.3 2,862,448 + -0.2 2,862,448 + -0.6 2,862,448 + -2.0 2,862,448 + +0.9 2,862,450 + +0.0 2,862,483 + +0.0 2,862,645 - +1.2 2,862,645 - +0.1 2,862,756 - -0.2 2,862,786 - QEN71_RS12800 0.11 +0.3 2,862,817 - QEN71_RS12800 0.13 -0.4 2,863,162 - QEN71_RS12800 0.41 -0.9 2,863,197 - QEN71_RS12800 0.44 -0.6 2,863,197 - QEN71_RS12800 0.44 -0.1 2,863,274 + QEN71_RS12800 0.50 +0.1 2,863,275 - QEN71_RS12800 0.50 +0.6 2,863,313 + QEN71_RS12800 0.53 -0.8 2,863,313 + QEN71_RS12800 0.53 +1.5 2,863,313 + QEN71_RS12800 0.53 -0.4 2,863,446 - QEN71_RS12800 0.64 -0.4 2,863,474 + QEN71_RS12800 0.67 -0.2 2,863,475 - QEN71_RS12800 0.67 -0.1 2,863,475 - QEN71_RS12800 0.67 +1.0 2,863,631 + QEN71_RS12800 0.79 -0.5 2,864,177 - +0.1 2,864,331 - QEN71_RS12805 0.11 +0.3 2,864,780 + QEN71_RS12805 0.88 -0.2
Or see this region's nucleotide sequence