Experiment: LB_noSalt with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS07845 and QEN71_RS07850 are separated by 193 nucleotides QEN71_RS07850 and QEN71_RS07855 overlap by 40 nucleotides QEN71_RS07855 and QEN71_RS07860 overlap by 4 nucleotides QEN71_RS07860 and QEN71_RS07865 are separated by 22 nucleotides
QEN71_RS07845: QEN71_RS07845 - urea transporter, at 1,738,955 to 1,739,902
_RS07845
QEN71_RS07850: QEN71_RS07850 - putative glycolipid-binding domain-containing protein, at 1,740,096 to 1,740,650
_RS07850
QEN71_RS07855: QEN71_RS07855 - alpha/beta fold hydrolase, at 1,740,611 to 1,741,531
_RS07855
QEN71_RS07860: QEN71_RS07860 - metal-dependent hydrolase, at 1,741,528 to 1,742,409
_RS07860
QEN71_RS07865: QEN71_RS07865 - SDR family NAD(P)-dependent oxidoreductase, at 1,742,432 to 1,743,340
_RS07865
Position (kb)
1740
1741
1742 Strain fitness (log2 ratio)
-1
0
1 at 1739.706 kb on + strand, within QEN71_RS07845 at 1739.717 kb on + strand, within QEN71_RS07845 at 1739.717 kb on + strand, within QEN71_RS07845 at 1739.717 kb on + strand, within QEN71_RS07845 at 1739.717 kb on + strand, within QEN71_RS07845 at 1739.718 kb on - strand, within QEN71_RS07845 at 1739.718 kb on - strand, within QEN71_RS07845 at 1739.718 kb on - strand, within QEN71_RS07845 at 1739.798 kb on + strand, within QEN71_RS07845 at 1739.798 kb on + strand, within QEN71_RS07845 at 1739.799 kb on - strand, within QEN71_RS07845 at 1739.902 kb on + strand at 1739.902 kb on + strand at 1739.902 kb on + strand at 1739.903 kb on - strand at 1739.985 kb on + strand at 1739.986 kb on - strand at 1739.986 kb on - strand at 1739.996 kb on - strand at 1739.996 kb on - strand at 1739.996 kb on - strand at 1739.996 kb on - strand at 1740.007 kb on + strand at 1740.007 kb on + strand at 1740.007 kb on + strand at 1740.008 kb on - strand at 1740.008 kb on - strand at 1740.041 kb on + strand at 1740.041 kb on + strand at 1740.055 kb on - strand at 1740.175 kb on - strand, within QEN71_RS07850 at 1740.175 kb on - strand, within QEN71_RS07850 at 1740.175 kb on - strand, within QEN71_RS07850 at 1740.228 kb on + strand, within QEN71_RS07850 at 1740.228 kb on + strand, within QEN71_RS07850 at 1740.228 kb on + strand, within QEN71_RS07850 at 1740.229 kb on - strand, within QEN71_RS07850 at 1740.515 kb on + strand, within QEN71_RS07850 at 1740.515 kb on + strand, within QEN71_RS07850 at 1740.515 kb on + strand, within QEN71_RS07850 at 1740.516 kb on - strand, within QEN71_RS07850 at 1740.516 kb on - strand, within QEN71_RS07850 at 1740.516 kb on - strand, within QEN71_RS07850 at 1740.516 kb on - strand, within QEN71_RS07850 at 1740.516 kb on - strand, within QEN71_RS07850 at 1740.540 kb on + strand, within QEN71_RS07850 at 1740.686 kb on - strand at 1740.801 kb on + strand, within QEN71_RS07855 at 1740.802 kb on - strand, within QEN71_RS07855 at 1740.985 kb on - strand, within QEN71_RS07855 at 1741.044 kb on + strand, within QEN71_RS07855 at 1741.044 kb on + strand, within QEN71_RS07855 at 1741.045 kb on - strand, within QEN71_RS07855 at 1741.045 kb on - strand, within QEN71_RS07855 at 1741.045 kb on - strand, within QEN71_RS07855 at 1741.311 kb on + strand, within QEN71_RS07855 at 1741.362 kb on + strand, within QEN71_RS07855 at 1741.412 kb on + strand, within QEN71_RS07855 at 1741.412 kb on + strand, within QEN71_RS07855 at 1741.412 kb on + strand, within QEN71_RS07855 at 1741.412 kb on + strand, within QEN71_RS07855 at 1741.413 kb on - strand, within QEN71_RS07855 at 1741.479 kb on + strand at 1741.479 kb on + strand at 1741.479 kb on + strand at 1741.479 kb on + strand at 1741.480 kb on - strand at 1741.480 kb on - strand at 1741.727 kb on + strand, within QEN71_RS07860 at 1741.896 kb on + strand, within QEN71_RS07860 at 1741.910 kb on + strand, within QEN71_RS07860 at 1741.910 kb on + strand, within QEN71_RS07860 at 1741.968 kb on - strand, within QEN71_RS07860 at 1742.034 kb on - strand, within QEN71_RS07860 at 1742.034 kb on - strand, within QEN71_RS07860 at 1742.184 kb on + strand, within QEN71_RS07860 at 1742.185 kb on - strand, within QEN71_RS07860 at 1742.216 kb on - strand, within QEN71_RS07860 at 1742.434 kb on - strand at 1742.436 kb on - strand at 1742.526 kb on + strand, within QEN71_RS07865 at 1742.527 kb on - strand, within QEN71_RS07865
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Cobalt chloride 0.25 mM remove 1,739,706 + QEN71_RS07845 0.79 -0.7 1,739,717 + QEN71_RS07845 0.80 -0.6 1,739,717 + QEN71_RS07845 0.80 -0.6 1,739,717 + QEN71_RS07845 0.80 -1.0 1,739,717 + QEN71_RS07845 0.80 -0.2 1,739,718 - QEN71_RS07845 0.80 -0.6 1,739,718 - QEN71_RS07845 0.80 -0.5 1,739,718 - QEN71_RS07845 0.80 -0.5 1,739,798 + QEN71_RS07845 0.89 -0.9 1,739,798 + QEN71_RS07845 0.89 +0.0 1,739,799 - QEN71_RS07845 0.89 +0.1 1,739,902 + +0.2 1,739,902 + +0.1 1,739,902 + +0.9 1,739,903 - -0.6 1,739,985 + +0.4 1,739,986 - -0.4 1,739,986 - +0.1 1,739,996 - +0.3 1,739,996 - -0.8 1,739,996 - -1.4 1,739,996 - -0.1 1,740,007 + -0.5 1,740,007 + +1.2 1,740,007 + +0.5 1,740,008 - +0.4 1,740,008 - -0.6 1,740,041 + +0.1 1,740,041 + +1.2 1,740,055 - -0.0 1,740,175 - QEN71_RS07850 0.14 +0.4 1,740,175 - QEN71_RS07850 0.14 -0.0 1,740,175 - QEN71_RS07850 0.14 -0.3 1,740,228 + QEN71_RS07850 0.24 +0.2 1,740,228 + QEN71_RS07850 0.24 -0.4 1,740,228 + QEN71_RS07850 0.24 +0.4 1,740,229 - QEN71_RS07850 0.24 -0.7 1,740,515 + QEN71_RS07850 0.75 +0.1 1,740,515 + QEN71_RS07850 0.75 +0.8 1,740,515 + QEN71_RS07850 0.75 +0.2 1,740,516 - QEN71_RS07850 0.76 +0.1 1,740,516 - QEN71_RS07850 0.76 -0.4 1,740,516 - QEN71_RS07850 0.76 +0.7 1,740,516 - QEN71_RS07850 0.76 +0.3 1,740,516 - QEN71_RS07850 0.76 -1.1 1,740,540 + QEN71_RS07850 0.80 +0.1 1,740,686 - -0.2 1,740,801 + QEN71_RS07855 0.21 -0.4 1,740,802 - QEN71_RS07855 0.21 +0.8 1,740,985 - QEN71_RS07855 0.41 +0.1 1,741,044 + QEN71_RS07855 0.47 -0.8 1,741,044 + QEN71_RS07855 0.47 -0.5 1,741,045 - QEN71_RS07855 0.47 -0.2 1,741,045 - QEN71_RS07855 0.47 -0.7 1,741,045 - QEN71_RS07855 0.47 -0.1 1,741,311 + QEN71_RS07855 0.76 +1.6 1,741,362 + QEN71_RS07855 0.82 -0.1 1,741,412 + QEN71_RS07855 0.87 -0.2 1,741,412 + QEN71_RS07855 0.87 -0.2 1,741,412 + QEN71_RS07855 0.87 -0.0 1,741,412 + QEN71_RS07855 0.87 +0.4 1,741,413 - QEN71_RS07855 0.87 -0.8 1,741,479 + +1.2 1,741,479 + +0.4 1,741,479 + -0.1 1,741,479 + -1.2 1,741,480 - -0.4 1,741,480 - -0.0 1,741,727 + QEN71_RS07860 0.23 +0.8 1,741,896 + QEN71_RS07860 0.42 -0.2 1,741,910 + QEN71_RS07860 0.43 -0.4 1,741,910 + QEN71_RS07860 0.43 +0.2 1,741,968 - QEN71_RS07860 0.50 -0.4 1,742,034 - QEN71_RS07860 0.57 +0.2 1,742,034 - QEN71_RS07860 0.57 -0.6 1,742,184 + QEN71_RS07860 0.74 +0.2 1,742,185 - QEN71_RS07860 0.74 +0.6 1,742,216 - QEN71_RS07860 0.78 -0.7 1,742,434 - +1.1 1,742,436 - +0.4 1,742,526 + QEN71_RS07865 0.10 +0.4 1,742,527 - QEN71_RS07865 0.10 -0.6
Or see this region's nucleotide sequence