Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03710

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
4,144,781	+		MIT1002_03709	0.37	+1.4
4,144,815	-		MIT1002_03709	0.40	-1.0
4,144,817	+		MIT1002_03709	0.40	+1.6
4,144,841	+		MIT1002_03709	0.42	-1.8
4,144,842	-		MIT1002_03709	0.42	-0.4
4,144,970	+		MIT1002_03709	0.51	-0.3
4,144,983	-		MIT1002_03709	0.52	-1.3
4,144,998	+		MIT1002_03709	0.53	+1.5
4,144,999	-		MIT1002_03709	0.53	-3.6
4,145,014	+		MIT1002_03709	0.54	-0.1
4,145,014	+		MIT1002_03709	0.54	+1.3
4,145,014	+		MIT1002_03709	0.54	-2.2
4,145,014	+		MIT1002_03709	0.54	+1.2
4,145,022	-		MIT1002_03709	0.55	-2.5
4,145,022	-		MIT1002_03709	0.55	-0.4
4,145,107	+		MIT1002_03709	0.61	-2.7
4,145,124	+		MIT1002_03709	0.62	-1.2
4,145,171	-		MIT1002_03709	0.65	-0.4
4,145,246	+		MIT1002_03709	0.71	-1.5
4,145,270	-		MIT1002_03709	0.72	-0.8
4,145,272	+		MIT1002_03709	0.72	-0.5
4,145,348	-		MIT1002_03709	0.78	-0.8
4,145,350	+		MIT1002_03709	0.78	-0.8
4,145,408	+		MIT1002_03709	0.82	+0.4
4,145,420	-		MIT1002_03709	0.83	+0.3
4,145,430	-		MIT1002_03709	0.84	-0.2
4,145,441	-		MIT1002_03709	0.85	-2.1
4,145,451	-		MIT1002_03709	0.85	-0.9
4,145,527	+				+0.4
4,145,527	+				+1.3
4,145,535	-				+1.4
4,145,545	-				-0.4
4,145,558	+				-1.0
4,145,558	+				+0.4
4,145,566	-				-0.8
4,145,590	+				-1.5
4,145,597	+				-0.3
4,145,611	+				-1.4
4,145,619	-				-0.8
4,145,619	-				+0.1
4,145,619	-				-1.8
4,145,619	-				+1.6
4,145,642	+				+0.7
4,145,725	-				-0.3
4,145,740	+				-1.5
4,145,742	+				-0.4
4,145,748	-				+1.2
4,145,750	+				-0.6
4,145,772	-				+1.2
4,145,825	-				+0.5
4,145,873	-		MIT1002_03710	0.12	-0.4
4,145,873	-		MIT1002_03710	0.12	-0.1
4,145,921	-		MIT1002_03710	0.18	+1.1
4,145,957	-		MIT1002_03710	0.23	-0.1
4,145,959	-		MIT1002_03710	0.23	+0.2
4,145,976	-		MIT1002_03710	0.25	+1.4
4,145,988	-		MIT1002_03710	0.26	-0.6
4,146,096	-		MIT1002_03710	0.39	-1.1
4,146,155	-		MIT1002_03710	0.46	+0.4
4,146,181	+		MIT1002_03710	0.49	-0.2
4,146,192	+		MIT1002_03710	0.51	-1.9
4,146,200	+		MIT1002_03710	0.52	+0.3
4,146,237	-		MIT1002_03710	0.56	-0.9
4,146,308	-		MIT1002_03710	0.65	+1.2
4,146,345	-		MIT1002_03710	0.69	-0.7
4,146,345	-		MIT1002_03710	0.69	+1.8
4,146,384	-		MIT1002_03710	0.74	-1.1
4,146,512	-		MIT1002_03710	0.89	-0.6
4,146,514	+		MIT1002_03710	0.89	-0.7
4,146,573	+				+1.1
4,146,618	+				-0.7
4,146,618	+				+0.8
4,146,618	+				-1.5
4,146,659	-				-0.8
4,146,673	+				-0.4
4,146,675	+				-1.4
4,146,675	+				-0.7
4,146,683	-				+1.4
4,146,708	+				+0.1
4,146,754	+		MIT1002_03711	0.18	+0.9
4,146,789	+		MIT1002_03711	0.25	+2.6
4,146,873	-		MIT1002_03711	0.40	+0.2
4,146,889	-		MIT1002_03711	0.44	+0.5
4,146,948	+		MIT1002_03711	0.55	-0.5
4,146,948	+		MIT1002_03711	0.55	-1.0
4,146,987	-		MIT1002_03711	0.62	+1.0
4,147,003	+		MIT1002_03711	0.65	-1.1
4,147,013	+		MIT1002_03711	0.67	+1.7
4,147,013	+		MIT1002_03711	0.67	+1.0
4,147,027	+		MIT1002_03711	0.69	-0.1
4,147,060	+		MIT1002_03711	0.76	-0.3
4,147,092	+		MIT1002_03711	0.82	+0.7
4,147,115	-		MIT1002_03711	0.86	-1.3
4,147,173	-				+0.0
4,147,198	+				+0.1
4,147,245	-				-0.7
4,147,280	-				+1.5
4,147,295	-		MIT1002_03712	0.10	-1.1
4,147,381	+		MIT1002_03712	0.24	+0.3
4,147,401	+		MIT1002_03712	0.28	-1.1
4,147,409	+		MIT1002_03712	0.29	-0.1
4,147,417	-		MIT1002_03712	0.30	+0.0
4,147,483	+		MIT1002_03712	0.41	-0.6
4,147,505	+		MIT1002_03712	0.45	+0.2
4,147,540	+		MIT1002_03712	0.51	-1.0
4,147,567	+		MIT1002_03712	0.55	-1.7