Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03525

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
3,942,918	+		MIT1002_03524	0.68	+0.4
3,942,929	+		MIT1002_03524	0.69	-1.8
3,943,129	-		MIT1002_03524	0.75	+1.8
3,943,129	-		MIT1002_03524	0.75	+0.8
3,943,156	-		MIT1002_03524	0.76	+0.1
3,943,216	+		MIT1002_03524	0.78	+1.3
3,943,259	-		MIT1002_03524	0.79	-0.1
3,943,329	+		MIT1002_03524	0.81	+3.1
3,943,341	+		MIT1002_03524	0.82	-0.9
3,943,416	+		MIT1002_03524	0.84	+0.7
3,943,544	+		MIT1002_03524	0.88	+0.7
3,943,552	-		MIT1002_03524	0.89	+1.1
3,943,557	-		MIT1002_03524	0.89	-1.2
3,943,557	-		MIT1002_03524	0.89	-0.0
3,943,557	-		MIT1002_03524	0.89	-0.2
3,943,643	-				-0.3
3,943,657	+				-1.5
3,943,670	+				+1.1
3,943,691	+				+0.1
3,943,693	-				+0.2
3,943,711	+				-0.7
3,943,714	-				-1.5
3,943,729	+				+0.3
3,943,729	+				+0.5
3,943,737	-				-0.3
3,943,737	-				+1.1
3,943,795	+				+0.9
3,943,889	+				-0.6
3,943,935	+				+0.1
3,943,935	+				+1.4
3,943,957	+				-0.9
3,943,965	-				-0.1
3,944,076	+		MIT1002_03525	0.25	-0.4
3,944,099	-		MIT1002_03525	0.28	+2.0
3,944,140	+		MIT1002_03525	0.34	-1.9
3,944,140	+		MIT1002_03525	0.34	+0.6
3,944,140	+		MIT1002_03525	0.34	-0.2
3,944,216	+		MIT1002_03525	0.45	-1.1
3,944,241	-		MIT1002_03525	0.49	-1.3
3,944,264	+		MIT1002_03525	0.52	+2.0
3,944,278	+		MIT1002_03525	0.54	+0.4
3,944,311	-		MIT1002_03525	0.59	+0.3
3,944,361	+		MIT1002_03525	0.66	+0.9
3,944,379	-		MIT1002_03525	0.69	+1.0
3,944,393	+		MIT1002_03525	0.71	-0.2
3,944,458	+		MIT1002_03525	0.80	+2.9
3,944,460	-		MIT1002_03525	0.80	+1.0
3,944,461	-		MIT1002_03525	0.80	+0.9
3,944,466	-		MIT1002_03525	0.81	-1.4
3,944,473	+		MIT1002_03525	0.82	-1.1
3,944,473	+		MIT1002_03525	0.82	+0.9
3,944,481	-		MIT1002_03525	0.83	+1.1
3,944,481	-		MIT1002_03525	0.83	+1.1
3,944,481	-		MIT1002_03525	0.83	+0.6
3,944,481	-		MIT1002_03525	0.83	+3.9
3,944,513	+		MIT1002_03525	0.88	-3.5
3,944,513	+		MIT1002_03525	0.88	+0.5
3,944,513	+		MIT1002_03525	0.88	+0.1
3,944,521	-		MIT1002_03525	0.89	-0.8
3,944,521	-		MIT1002_03525	0.89	-0.4
3,944,521	-		MIT1002_03525	0.89	-0.2
3,944,610	-				-2.4
3,944,615	-				+0.1
3,944,615	-				-0.2
3,944,621	+				-0.6
3,944,654	+				-0.0
3,944,662	-		MIT1002_03526	0.11	-0.3
3,944,713	+		MIT1002_03526	0.19	+0.6
3,944,721	+		MIT1002_03526	0.20	+2.0
3,944,729	-		MIT1002_03526	0.22	+0.6
3,944,729	-		MIT1002_03526	0.22	-1.0
3,944,853	+		MIT1002_03526	0.41	+0.6
3,944,925	-		MIT1002_03526	0.53	-0.1
3,945,021	+		MIT1002_03526	0.68	-0.9
3,945,035	+		MIT1002_03526	0.70	-1.5
3,945,037	+		MIT1002_03526	0.71	+2.0
3,945,116	+		MIT1002_03526	0.83	+1.4
3,945,155	-		MIT1002_03526	0.89	-2.9
3,945,172	+				+1.2
3,945,386	+				-0.8
3,945,407	+				+0.1
3,945,410	+				-0.6
3,945,449	-				-2.5
3,945,542	+				+0.4
3,945,563	-				-1.7