Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03329

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
3,718,519	+		MIT1002_03328	0.62	-0.5
3,718,536	-		MIT1002_03328	0.63	+1.2
3,718,556	-		MIT1002_03328	0.64	-1.3
3,718,642	+		MIT1002_03328	0.68	-0.6
3,718,647	+		MIT1002_03328	0.68	+0.1
3,718,652	+		MIT1002_03328	0.69	-3.7
3,718,652	+		MIT1002_03328	0.69	+2.7
3,718,660	-		MIT1002_03328	0.69	+2.4
3,718,660	-		MIT1002_03328	0.69	+0.1
3,718,664	+		MIT1002_03328	0.69	+0.2
3,718,664	+		MIT1002_03328	0.69	+0.2
3,718,664	+		MIT1002_03328	0.69	+1.5
3,718,664	+		MIT1002_03328	0.69	+1.0
3,718,670	+		MIT1002_03328	0.70	+2.4
3,718,670	+		MIT1002_03328	0.70	+0.4
3,718,678	-		MIT1002_03328	0.70	-1.7
3,718,793	-		MIT1002_03328	0.76	-1.1
3,718,825	-		MIT1002_03328	0.77	+0.4
3,718,928	+		MIT1002_03328	0.82	+0.9
3,718,936	-		MIT1002_03328	0.83	-1.3
3,718,938	+		MIT1002_03328	0.83	+0.7
3,718,938	+		MIT1002_03328	0.83	-2.2
3,718,938	+		MIT1002_03328	0.83	-1.3
3,718,946	-		MIT1002_03328	0.83	-0.5
3,718,946	-		MIT1002_03328	0.83	-1.0
3,718,946	-		MIT1002_03328	0.83	+1.0
3,718,946	-		MIT1002_03328	0.83	+0.4
3,718,973	+		MIT1002_03328	0.84	-0.3
3,718,973	+		MIT1002_03328	0.84	+0.8
3,718,976	-		MIT1002_03328	0.85	+0.3
3,718,980	+		MIT1002_03328	0.85	-1.8
3,718,981	-		MIT1002_03328	0.85	-1.9
3,719,002	+		MIT1002_03328	0.86	+0.2
3,719,003	-		MIT1002_03328	0.86	+1.6
3,719,022	+		MIT1002_03328	0.87	-1.0
3,719,032	+		MIT1002_03328	0.87	-0.1
3,719,078	-		MIT1002_03328	0.90	+1.8
3,719,140	-				-0.0
3,719,174	-				-1.7
3,719,186	+				-1.2
3,719,196	+				+0.8
3,719,297	+				+0.1
3,719,316	+				+0.4
3,719,316	+				+0.7
3,719,449	-				-0.8
3,719,493	+				-0.7
3,719,525	-				-1.1
3,719,531	-				-1.4
3,719,539	-				-1.7
3,719,540	+				-1.4
3,719,607	+		MIT1002_03329	0.11	-1.6
3,719,612	+		MIT1002_03329	0.12	-1.5
3,719,647	+		MIT1002_03329	0.16	-1.6
3,719,647	+		MIT1002_03329	0.16	-1.1
3,719,655	-		MIT1002_03329	0.17	-0.9
3,719,707	-		MIT1002_03329	0.23	-1.4
3,719,718	+		MIT1002_03329	0.24	-1.0
3,719,731	+		MIT1002_03329	0.25	-1.0
3,719,742	-		MIT1002_03329	0.26	-2.8
3,719,744	-		MIT1002_03329	0.27	-2.6
3,719,780	+		MIT1002_03329	0.31	-2.5
3,719,788	-		MIT1002_03329	0.32	+0.1
3,719,814	-		MIT1002_03329	0.34	-0.4
3,719,814	-		MIT1002_03329	0.34	-2.0
3,719,815	-		MIT1002_03329	0.35	-1.7
3,719,860	-		MIT1002_03329	0.40	-3.3
3,719,860	-		MIT1002_03329	0.40	+1.1
3,719,907	+		MIT1002_03329	0.45	-3.2
3,719,958	-		MIT1002_03329	0.50	-1.7
3,719,958	-		MIT1002_03329	0.50	-2.6
3,720,041	+		MIT1002_03329	0.60	-0.4
3,720,042	-		MIT1002_03329	0.60	-1.5
3,720,059	-		MIT1002_03329	0.62	-0.7
3,720,458	+				+0.8
3,720,459	-				-0.3
3,720,459	-				-1.1
3,720,475	-				+1.2
3,720,536	-				+0.7
3,720,603	-				+1.2
3,720,719	+		MIT1002_03330	0.19	-0.8
3,720,818	-		MIT1002_03330	0.27	+0.7
3,720,836	-		MIT1002_03330	0.29	-0.3
3,720,888	-		MIT1002_03330	0.34	-0.1
3,720,935	+		MIT1002_03330	0.38	+0.2
3,720,943	-		MIT1002_03330	0.38	-1.7
3,720,943	-		MIT1002_03330	0.38	+1.4
3,720,949	+		MIT1002_03330	0.39	-0.2
3,720,965	-		MIT1002_03330	0.40	-0.3
3,721,017	+		MIT1002_03330	0.45	-0.1
3,721,025	-		MIT1002_03330	0.46	-0.9
3,721,213	+		MIT1002_03330	0.62	+1.1
3,721,220	-		MIT1002_03330	0.63	-0.6
3,721,222	+		MIT1002_03330	0.63	+0.1
3,721,243	+		MIT1002_03330	0.65	-1.9
3,721,320	-		MIT1002_03330	0.72	+0.8
3,721,353	+		MIT1002_03330	0.75	-0.8
3,721,366	-		MIT1002_03330	0.76	-0.3