Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03305

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
3,685,989	+		MIT1002_03303	0.89	-0.5
3,685,990	+		MIT1002_03303	0.89	+2.0
3,685,997	-		MIT1002_03303	0.90	+0.7
3,686,097	+				-0.4
3,686,097	+				-0.2
3,686,174	+				+0.8
3,686,174	-				+0.1
3,686,198	-				-2.0
3,686,268	-		MIT1002_03304	0.18	-0.5
3,686,333	+		MIT1002_03304	0.26	-1.8
3,686,353	+		MIT1002_03304	0.29	-1.1
3,686,363	+		MIT1002_03304	0.30	-2.3
3,686,371	-		MIT1002_03304	0.31	-0.7
3,686,371	-		MIT1002_03304	0.31	-0.7
3,686,432	+		MIT1002_03304	0.39	+1.6
3,686,444	+		MIT1002_03304	0.41	-1.4
3,686,642	+		MIT1002_03304	0.67	-0.9
3,686,650	-		MIT1002_03304	0.68	-0.7
3,686,691	+		MIT1002_03304	0.73	+0.1
3,686,691	+		MIT1002_03304	0.73	+2.2
3,686,699	-		MIT1002_03304	0.74	-1.0
3,686,816	+		MIT1002_03304	0.90	-1.3
3,686,856	-				-1.0
3,686,856	-				+1.3
3,686,856	-				-1.6
3,686,994	-				-1.0
3,686,999	-				+1.9
3,687,004	-				+0.7
3,687,045	+				-1.3
3,687,155	+		MIT1002_03305	0.16	+1.0
3,687,155	+		MIT1002_03305	0.16	-0.2
3,687,189	-		MIT1002_03305	0.18	+0.1
3,687,295	-		MIT1002_03305	0.26	+0.1
3,687,391	+		MIT1002_03305	0.33	-0.1
3,687,391	+		MIT1002_03305	0.33	-0.7
3,687,483	+		MIT1002_03305	0.40	+0.8
3,687,609	+		MIT1002_03305	0.49	+2.1
3,687,609	-		MIT1002_03305	0.49	+1.1
3,687,621	+		MIT1002_03305	0.50	+0.6
3,687,675	+		MIT1002_03305	0.54	-0.5
3,687,852	-		MIT1002_03305	0.67	-3.2
3,687,864	-		MIT1002_03305	0.68	+1.6
3,687,955	+		MIT1002_03305	0.75	-0.9
3,687,963	-		MIT1002_03305	0.76	-0.2
3,688,038	-		MIT1002_03305	0.81	+3.5
3,688,038	-		MIT1002_03305	0.81	+0.8
3,688,045	+		MIT1002_03305	0.82	+0.6
3,688,053	+		MIT1002_03305	0.82	+0.9
3,688,061	-		MIT1002_03305	0.83	+1.9
3,688,115	+		MIT1002_03305	0.87	-1.2
3,688,115	-		MIT1002_03305	0.87	+1.0
3,688,159	+				-1.7
3,688,186	+				-0.0
3,688,206	-				+0.4
3,688,219	+				-0.6
3,688,219	+				-1.6
3,688,228	-				+0.2
3,688,247	+				+0.2
3,688,253	-				+1.6
3,688,333	+				-1.1
3,688,345	+				+0.9
3,688,377	+				-1.4
3,688,385	-				+0.2
3,688,385	-				-0.8
3,688,385	-				+0.6
3,688,449	+		MIT1002_03306	0.11	-0.8
3,688,457	-		MIT1002_03306	0.12	-1.3
3,688,504	-		MIT1002_03306	0.15	+0.1
3,688,551	+		MIT1002_03306	0.18	+1.4
3,688,748	+		MIT1002_03306	0.31	-0.8
3,688,811	-		MIT1002_03306	0.35	+1.1
3,688,811	-		MIT1002_03306	0.35	-0.4
3,688,900	+		MIT1002_03306	0.41	-2.1
3,688,962	-		MIT1002_03306	0.45	-1.3
3,688,962	-		MIT1002_03306	0.45	+2.1
3,689,032	+		MIT1002_03306	0.49	+1.1
3,689,045	-		MIT1002_03306	0.50	-1.8
3,689,105	+		MIT1002_03306	0.54	+0.9
3,689,107	+		MIT1002_03306	0.54	-2.5
3,689,122	+		MIT1002_03306	0.55	-0.3
3,689,130	-		MIT1002_03306	0.55	+1.4
3,689,187	-		MIT1002_03306	0.59	+0.6
3,689,289	-		MIT1002_03306	0.66	+1.1