Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03247

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
3,616,269	+				+2.1
3,616,302	-				-0.7
3,616,302	-				+0.5
3,616,368	+				+0.2
3,616,412	-		MIT1002_03246	0.13	-0.5
3,616,431	-		MIT1002_03246	0.15	+1.8
3,616,656	+		MIT1002_03246	0.40	+1.7
3,616,673	+		MIT1002_03246	0.42	+0.1
3,616,684	-		MIT1002_03246	0.43	-0.7
3,616,710	+		MIT1002_03246	0.46	-0.4
3,616,713	+		MIT1002_03246	0.46	+1.3
3,616,723	+		MIT1002_03246	0.48	+0.3
3,616,733	+		MIT1002_03246	0.49	-1.8
3,616,779	-		MIT1002_03246	0.54	-0.2
3,616,803	+		MIT1002_03246	0.56	+0.9
3,616,817	-		MIT1002_03246	0.58	-0.7
3,616,817	-		MIT1002_03246	0.58	+1.4
3,616,834	+		MIT1002_03246	0.60	-1.7
3,616,840	-		MIT1002_03246	0.60	-1.8
3,616,841	-		MIT1002_03246	0.61	+2.0
3,616,880	+		MIT1002_03246	0.65	+0.2
3,617,029	+		MIT1002_03246	0.81	+0.5
3,617,112	-				-0.7
3,617,235	-				-0.8
3,617,256	+				-0.9
3,617,317	-		MIT1002_03247	0.38	-0.9
3,617,417	+		MIT1002_03247	0.86	+2.3
3,617,534	+				-1.5
3,617,559	-				-2.0
3,617,669	+				-0.8
3,617,675	-				+0.2
3,617,740	+				-0.1
3,617,740	+				-0.2
3,617,748	-				-1.4
3,617,812	-				+1.1
3,617,832	+				-2.3
3,617,838	-				+0.7
3,617,851	-				-1.3
3,617,851	-				+0.1
3,617,871	+				-0.0
3,617,910	-				+0.6
3,617,910	-				+0.1
3,617,910	-				-0.4
3,617,920	+				-0.7
3,617,926	-				-1.6
3,617,928	-				+0.8
3,617,978	-				-0.7
3,618,027	-				+1.9
3,618,113	+				+0.2
3,618,336	+		MIT1002_03248	0.35	+0.2
3,618,372	-		MIT1002_03248	0.40	+1.7
3,618,380	+		MIT1002_03248	0.41	+0.1
3,618,398	+		MIT1002_03248	0.43	-0.9
3,618,406	+		MIT1002_03248	0.44	-0.8
3,618,429	-		MIT1002_03248	0.47	+1.0