Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03201

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
3,567,703	+				-2.2
3,567,890	+		MIT1002_03200	0.11	+0.8
3,567,946	-		MIT1002_03200	0.20	-0.7
3,568,031	-		MIT1002_03200	0.35	-0.2
3,568,036	+		MIT1002_03200	0.36	-5.0
3,568,036	+		MIT1002_03200	0.36	-1.6
3,568,044	-		MIT1002_03200	0.37	-2.8
3,568,044	-		MIT1002_03200	0.37	-1.8
3,568,050	-		MIT1002_03200	0.38	-0.6
3,568,102	-		MIT1002_03200	0.47	+0.6
3,568,125	-		MIT1002_03200	0.51	-2.7
3,568,153	+		MIT1002_03200	0.56	-1.8
3,568,153	+		MIT1002_03200	0.56	-0.5
3,568,153	+		MIT1002_03200	0.56	-0.8
3,568,192	+		MIT1002_03200	0.62	-1.5
3,568,211	+		MIT1002_03200	0.66	-1.3
3,568,225	-		MIT1002_03200	0.68	-1.2
3,568,476	+				-0.0
3,568,476	+				+1.3
3,568,482	+				+1.1
3,568,484	-				-0.8
3,568,503	-				+0.2
3,568,546	+				+1.9
3,568,615	+				-0.7
3,568,654	+				+1.2
3,568,690	+				+0.6
3,568,780	+				+0.3
3,568,792	+				+0.5
3,568,797	+				+1.7
3,568,845	+		MIT1002_03201	0.12	+3.3
3,568,851	+		MIT1002_03201	0.12	-0.2
3,568,853	-		MIT1002_03201	0.12	-1.6
3,568,891	+		MIT1002_03201	0.14	-0.5
3,568,899	-		MIT1002_03201	0.14	+0.4
3,568,909	-		MIT1002_03201	0.15	+1.1
3,568,927	+		MIT1002_03201	0.16	-2.0
3,568,927	+		MIT1002_03201	0.16	-1.5
3,568,927	+		MIT1002_03201	0.16	-0.5
3,568,942	-		MIT1002_03201	0.16	+0.8
3,568,973	+		MIT1002_03201	0.18	+1.7
3,568,976	-		MIT1002_03201	0.18	+1.4
3,568,981	-		MIT1002_03201	0.18	-0.8
3,569,120	+		MIT1002_03201	0.25	+0.1
3,569,181	+		MIT1002_03201	0.28	-0.4
3,569,204	-		MIT1002_03201	0.29	-0.0
3,569,210	-		MIT1002_03201	0.30	-0.4
3,569,302	-		MIT1002_03201	0.34	+0.6
3,569,347	+		MIT1002_03201	0.36	-0.2
3,569,350	-		MIT1002_03201	0.36	+0.1
3,569,355	-		MIT1002_03201	0.37	-1.5
3,569,391	-		MIT1002_03201	0.38	-1.1
3,569,406	+		MIT1002_03201	0.39	+0.4
3,569,437	+		MIT1002_03201	0.41	+2.2
3,569,445	-		MIT1002_03201	0.41	-2.5
3,569,454	+		MIT1002_03201	0.41	-0.8
3,569,462	-		MIT1002_03201	0.42	-1.2
3,569,478	+		MIT1002_03201	0.43	+1.5
3,569,484	-		MIT1002_03201	0.43	+1.9
3,569,486	-		MIT1002_03201	0.43	+0.6
3,569,543	+		MIT1002_03201	0.46	-0.5
3,569,543	+		MIT1002_03201	0.46	-1.9
3,569,547	+		MIT1002_03201	0.46	-1.4
3,569,631	+		MIT1002_03201	0.50	-0.6
3,569,649	-		MIT1002_03201	0.51	-1.4
3,569,649	-		MIT1002_03201	0.51	+0.1
3,569,649	-		MIT1002_03201	0.51	+0.2
3,569,688	+		MIT1002_03201	0.53	+1.3
3,569,717	+		MIT1002_03201	0.54	+1.4
3,569,717	+		MIT1002_03201	0.54	+1.2
3,569,724	-		MIT1002_03201	0.54	+0.1
3,569,774	+		MIT1002_03201	0.57	+0.4
3,569,782	-		MIT1002_03201	0.57	-2.6
3,569,782	-		MIT1002_03201	0.57	+0.5
3,569,782	-		MIT1002_03201	0.57	-1.6
3,569,782	-		MIT1002_03201	0.57	+0.0
3,569,782	-		MIT1002_03201	0.57	-1.2
3,569,784	+		MIT1002_03201	0.57	-1.0
3,569,812	-		MIT1002_03201	0.59	-0.4
3,569,843	-		MIT1002_03201	0.60	-1.4
3,569,883	-		MIT1002_03201	0.62	-1.6
3,569,897	+		MIT1002_03201	0.63	-2.2
3,569,897	+		MIT1002_03201	0.63	+0.9
3,569,915	-		MIT1002_03201	0.64	-0.4
3,569,918	+		MIT1002_03201	0.64	-0.8
3,569,920	-		MIT1002_03201	0.64	-0.6
3,569,986	+		MIT1002_03201	0.67	+0.5
3,569,998	+		MIT1002_03201	0.68	+0.1
3,570,021	-		MIT1002_03201	0.69	-1.8
3,570,082	-		MIT1002_03201	0.72	+1.4
3,570,094	+		MIT1002_03201	0.72	+0.1
3,570,094	+		MIT1002_03201	0.72	-1.1
3,570,102	-		MIT1002_03201	0.73	-1.0
3,570,111	+		MIT1002_03201	0.73	-0.9
3,570,111	+		MIT1002_03201	0.73	-1.4
3,570,121	+		MIT1002_03201	0.74	-1.9
3,570,129	-		MIT1002_03201	0.74	-1.4
3,570,143	+		MIT1002_03201	0.75	-1.2
3,570,192	-		MIT1002_03201	0.77	-2.1
3,570,199	+		MIT1002_03201	0.77	-0.3
3,570,207	-		MIT1002_03201	0.78	-0.6
3,570,207	-		MIT1002_03201	0.78	-0.7
3,570,221	-		MIT1002_03201	0.79	+1.5
3,570,229	+		MIT1002_03201	0.79	-0.5
3,570,248	+		MIT1002_03201	0.80	-0.6
3,570,256	-		MIT1002_03201	0.80	-0.3
3,570,268	+		MIT1002_03201	0.81	+0.2
3,570,337	+		MIT1002_03201	0.84	-1.9
3,570,340	-		MIT1002_03201	0.84	+1.8
3,570,340	-		MIT1002_03201	0.84	+1.0
3,570,342	+		MIT1002_03201	0.84	+0.7
3,570,345	-		MIT1002_03201	0.85	+0.9
3,570,345	-		MIT1002_03201	0.85	-1.0
3,570,345	-		MIT1002_03201	0.85	-1.6
3,570,345	-		MIT1002_03201	0.85	-0.2
3,570,345	-		MIT1002_03201	0.85	+1.9
3,570,345	-		MIT1002_03201	0.85	+0.1
3,570,350	-		MIT1002_03201	0.85	-0.2
3,570,382	+		MIT1002_03201	0.86	-0.2
3,570,388	-		MIT1002_03201	0.87	+1.8
3,570,388	-		MIT1002_03201	0.87	+0.4
3,570,411	-		MIT1002_03201	0.88	+0.5
3,570,420	+		MIT1002_03201	0.88	+1.9
3,570,426	-		MIT1002_03201	0.89	+3.2
3,570,428	-		MIT1002_03201	0.89	+0.2
3,570,505	+				+1.3
3,570,513	-				-0.5
3,570,522	+				-2.6
3,570,522	+				+1.0
3,570,522	+				-0.8
3,570,522	+				-1.9
3,570,530	-				+1.1
3,570,530	-				+1.2
3,570,535	-				+0.8
3,570,562	+				-0.3
3,570,562	+				-1.6
3,570,570	-				+0.6
3,570,570	-				-1.4
3,570,579	+				+0.2
3,570,580	-				+1.0
3,570,843	+				+0.2
3,570,851	-				-1.1
3,570,872	+		MIT1002_03202	0.11	-1.3
3,570,906	+		MIT1002_03202	0.17	-0.9
3,570,906	+		MIT1002_03202	0.17	-0.4
3,570,906	+		MIT1002_03202	0.17	-0.9
3,570,906	+		MIT1002_03202	0.17	-0.1
3,570,906	+		MIT1002_03202	0.17	+0.4
3,570,906	+		MIT1002_03202	0.17	+1.4
3,570,906	+		MIT1002_03202	0.17	-1.9
3,570,906	+		MIT1002_03202	0.17	+2.3
3,570,906	+		MIT1002_03202	0.17	-2.8
3,570,906	+		MIT1002_03202	0.17	-0.5
3,570,906	+		MIT1002_03202	0.17	+1.2
3,570,907	-		MIT1002_03202	0.17	+1.4
3,570,914	-		MIT1002_03202	0.19	+1.7
3,570,914	-		MIT1002_03202	0.19	-1.4
3,570,914	-		MIT1002_03202	0.19	+1.4
3,570,914	-		MIT1002_03202	0.19	-1.9
3,570,914	-		MIT1002_03202	0.19	+0.5
3,570,914	-		MIT1002_03202	0.19	+0.1
3,570,919	+		MIT1002_03202	0.20	-0.0
3,570,919	+		MIT1002_03202	0.20	-1.2
3,570,920	+		MIT1002_03202	0.20	-1.4
3,570,927	-		MIT1002_03202	0.21	+0.5
3,570,938	+		MIT1002_03202	0.23	+1.8
3,571,019	+		MIT1002_03202	0.38	-1.1
3,571,038	+		MIT1002_03202	0.42	+0.8
3,571,043	+		MIT1002_03202	0.43	-0.3
3,571,043	+		MIT1002_03202	0.43	+1.4
3,571,046	-		MIT1002_03202	0.43	+2.1
3,571,152	+		MIT1002_03202	0.63	+0.1
3,571,217	-		MIT1002_03202	0.75	+0.3
3,571,217	-		MIT1002_03202	0.75	+0.4
3,571,265	-		MIT1002_03202	0.84	+3.0
3,571,267	+		MIT1002_03202	0.85	-0.8
3,571,281	+		MIT1002_03202	0.87	-0.2
3,571,448	+		MIT1002_03203	0.14	-0.4
3,571,490	-		MIT1002_03203	0.20	+0.9
3,571,519	+		MIT1002_03203	0.24	+0.4
3,571,537	+		MIT1002_03203	0.26	-1.6
3,571,539	+		MIT1002_03203	0.26	+0.1
3,571,555	+		MIT1002_03203	0.29	+0.9