Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03127

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
3,480,219	+		MIT1002_03126	0.88	-1.1
3,480,258	+		MIT1002_03126	0.89	+0.7
3,480,268	-		MIT1002_03126	0.90	+0.4
3,480,436	-				+2.6
3,480,452	+				+1.7
3,480,491	-				-0.7
3,480,491	-				+0.3
3,480,503	+				-1.6
3,480,503	+				-1.5
3,480,511	-				+1.2
3,480,522	+				-1.0
3,480,529	-				-1.3
3,480,837	+				+1.2
3,480,837	+				+0.4
3,480,844	+				+0.9
3,480,877	+				-1.1
3,480,901	-				-0.3
3,480,901	-				-0.3
3,481,022	-				-0.3
3,481,202	+		MIT1002_03127	0.17	-1.5
3,481,233	-		MIT1002_03127	0.51	-1.3
3,481,358	-				+0.2
3,481,368	-				-0.1
3,481,380	+				-2.9
3,481,417	-				+0.5
3,481,428	+				+0.5
3,481,453	-				-0.3
3,481,655	+		MIT1002_03128	0.14	+0.2
3,481,655	+		MIT1002_03128	0.14	-2.5
3,481,760	+		MIT1002_03128	0.30	-0.3
3,481,768	-		MIT1002_03128	0.31	-1.5
3,481,789	-		MIT1002_03128	0.34	-1.2
3,481,794	-		MIT1002_03128	0.35	-1.3
3,481,820	-		MIT1002_03128	0.39	+0.1
3,481,831	+		MIT1002_03128	0.40	+0.2
3,481,831	+		MIT1002_03128	0.40	-1.4
3,481,831	+		MIT1002_03128	0.40	-0.7
3,481,831	+		MIT1002_03128	0.40	-0.0
3,481,839	+		MIT1002_03128	0.41	-0.8
3,481,839	+		MIT1002_03128	0.41	+0.6
3,481,839	-		MIT1002_03128	0.41	-0.3
3,481,839	-		MIT1002_03128	0.41	-2.9
3,481,847	-		MIT1002_03128	0.43	-1.4
3,481,847	-		MIT1002_03128	0.43	-0.7
3,481,847	-		MIT1002_03128	0.43	-1.3
3,482,067	+		MIT1002_03128	0.76	-1.8
3,482,112	+		MIT1002_03128	0.83	-0.6
3,482,118	-		MIT1002_03128	0.84	-2.0
3,482,215	+				+0.9
3,482,219	-				+0.3
3,482,221	+				+2.3
3,482,236	+				+1.5
3,482,244	-				-1.2