Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03081

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
3,432,972	+		MIT1002_03081	0.40	-0.2
3,433,033	-		MIT1002_03081	0.44	+1.4
3,433,246	+		MIT1002_03081	0.56	+0.8
3,433,968	+				+1.4
3,434,087	+				+2.1
3,434,089	+				-0.6
3,434,097	-				+0.3
3,434,097	-				-1.3
3,434,097	-				-0.4
3,434,097	-				+1.0
3,434,097	-				-0.7
3,434,097	-				-0.1
3,434,097	-				-1.9
3,434,097	-				+0.7
3,434,259	+				+1.9
3,434,359	-		MIT1002_03082	0.18	-2.1
3,434,507	-				+0.1
3,434,516	+				-0.9
3,434,558	-				-2.0
3,434,604	-				-0.7
3,434,617	+				-1.7
3,434,625	-				-0.3
3,434,625	-				-1.4
3,434,715	-				-1.3
3,434,759	+				+0.5
3,434,767	-				+1.2
3,434,767	-				+0.3
3,434,767	-				+0.8
3,434,767	-				-0.3
3,434,767	-				+1.4
3,434,767	-				-0.8
3,434,767	-				-0.1
3,434,767	-				+0.4
3,434,835	+		MIT1002_03083	0.11	+0.2
3,434,851	+		MIT1002_03083	0.13	+1.7
3,434,917	-		MIT1002_03083	0.23	+2.3