Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02791

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
3,094,356	-		MIT1002_02790	0.19	-0.1
3,094,398	+		MIT1002_02790	0.23	-0.8
3,094,401	-		MIT1002_02790	0.23	+0.0
3,094,527	-		MIT1002_02790	0.34	+0.2
3,094,533	+		MIT1002_02790	0.34	+1.4
3,094,553	+		MIT1002_02790	0.36	+1.1
3,094,617	-		MIT1002_02790	0.41	+1.3
3,094,617	-		MIT1002_02790	0.41	-0.9
3,094,737	+		MIT1002_02790	0.51	-2.9
3,094,747	+		MIT1002_02790	0.52	-0.3
3,094,755	-		MIT1002_02790	0.53	+0.4
3,094,761	+		MIT1002_02790	0.53	+1.4
3,094,767	+		MIT1002_02790	0.54	+1.5
3,094,774	+		MIT1002_02790	0.54	-2.0
3,094,796	+		MIT1002_02790	0.56	-0.7
3,094,891	+		MIT1002_02790	0.64	-2.6
3,094,899	-		MIT1002_02790	0.65	-2.3
3,095,025	+		MIT1002_02790	0.75	+1.5
3,095,028	-		MIT1002_02790	0.76	-0.1
3,095,033	-		MIT1002_02790	0.76	+0.4
3,095,231	-				+0.3
3,095,231	-				+0.1
3,095,322	-				-0.6
3,095,417	-				-0.8
3,095,537	+		MIT1002_02791	0.17	+0.6
3,095,564	+		MIT1002_02791	0.20	-1.5
3,095,629	+		MIT1002_02791	0.26	+0.8
3,095,657	+		MIT1002_02791	0.28	-1.5
3,095,682	+		MIT1002_02791	0.30	+0.6
3,095,690	-		MIT1002_02791	0.31	+1.6
3,095,690	-		MIT1002_02791	0.31	-0.5
3,095,690	-		MIT1002_02791	0.31	+0.2
3,095,741	-		MIT1002_02791	0.36	+0.9
3,095,783	+		MIT1002_02791	0.39	+0.1
3,095,808	+		MIT1002_02791	0.42	+4.1
3,095,883	+		MIT1002_02791	0.48	-1.3
3,095,965	+		MIT1002_02791	0.56	-0.3
3,095,965	+		MIT1002_02791	0.56	+0.2
3,095,973	-		MIT1002_02791	0.56	-1.0
3,096,040	+		MIT1002_02791	0.62	-2.4
3,096,040	+		MIT1002_02791	0.62	+0.2
3,096,048	-		MIT1002_02791	0.63	-0.2
3,096,080	+		MIT1002_02791	0.66	+0.6
3,096,089	-		MIT1002_02791	0.67	-0.4
3,096,211	-		MIT1002_02791	0.78	+0.8
3,096,234	+		MIT1002_02791	0.80	-1.6
3,096,425	-				-3.4
3,096,513	-				+0.4
3,096,513	-				-1.3
3,096,513	-				-0.1
3,096,610	-				-0.6
3,096,647	-				+0.6
3,096,654	-				-1.3
3,096,679	+				+0.3
3,096,704	+				-0.3
3,096,704	+				+0.7