Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02775

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
3,074,841	+				-0.1
3,074,851	+				+2.9
3,074,851	-				-0.6
3,074,934	-				+0.8
3,074,941	+				-1.0
3,074,948	-				+0.2
3,074,981	-				+1.2
3,075,016	-		MIT1002_02774	0.13	-1.2
3,075,152	+		MIT1002_02774	0.29	+1.0
3,075,186	+		MIT1002_02774	0.33	+2.1
3,075,251	+		MIT1002_02774	0.41	-0.8
3,075,251	+		MIT1002_02774	0.41	-0.6
3,075,257	-		MIT1002_02774	0.42	+1.5
3,075,259	-		MIT1002_02774	0.42	-0.3
3,075,283	-		MIT1002_02774	0.45	-0.2
3,075,331	+		MIT1002_02774	0.50	-0.5
3,075,338	-		MIT1002_02774	0.51	-1.7
3,075,345	+		MIT1002_02774	0.52	+0.5
3,075,370	+		MIT1002_02774	0.55	-0.3
3,075,433	-		MIT1002_02774	0.62	-0.5
3,075,518	-		MIT1002_02774	0.72	-1.9
3,075,519	-		MIT1002_02774	0.73	+0.7
3,075,644	+		MIT1002_02774	0.87	+1.4
3,075,683	-				-0.8
3,075,751	-				+2.0
3,075,756	+				+0.7
3,075,791	+				-0.3
3,075,829	+				+2.1
3,075,844	-				-1.1
3,075,922	-		MIT1002_02775	0.13	-0.8
3,075,954	+		MIT1002_02775	0.17	+0.2
3,075,981	-		MIT1002_02775	0.19	+0.8
3,076,034	+		MIT1002_02775	0.24	-0.8
3,076,112	-		MIT1002_02775	0.32	-0.3
3,076,118	-		MIT1002_02775	0.33	-1.1
3,076,176	+		MIT1002_02775	0.38	+0.8
3,076,184	-		MIT1002_02775	0.39	-0.4
3,076,184	-		MIT1002_02775	0.39	-2.9
3,076,202	+		MIT1002_02775	0.41	-0.3
3,076,208	-		MIT1002_02775	0.42	+0.8
3,076,218	-		MIT1002_02775	0.43	+0.5
3,076,603	+		MIT1002_02775	0.80	+1.8
3,076,610	+		MIT1002_02775	0.81	+0.8
3,076,611	-		MIT1002_02775	0.81	-0.8
3,076,643	+		MIT1002_02775	0.84	-0.7
3,076,643	+		MIT1002_02775	0.84	+0.4
3,076,651	-		MIT1002_02775	0.85	-2.0
3,076,681	+		MIT1002_02775	0.88	+1.3
3,076,745	+				-0.3
3,076,746	+				-1.1
3,076,947	+				-0.9
3,076,994	-		MIT1002_02776	0.12	+0.1
3,077,003	+		MIT1002_02776	0.13	-1.1
3,077,003	+		MIT1002_02776	0.13	-0.2
3,077,011	-		MIT1002_02776	0.14	-0.1
3,077,075	-		MIT1002_02776	0.21	+1.8
3,077,080	+		MIT1002_02776	0.22	-3.1
3,077,088	-		MIT1002_02776	0.23	+1.0
3,077,165	-		MIT1002_02776	0.31	+1.0
3,077,165	-		MIT1002_02776	0.31	-1.4
3,077,183	-		MIT1002_02776	0.33	-0.3
3,077,447	-		MIT1002_02776	0.62	+0.2
3,077,537	+		MIT1002_02776	0.72	-0.6
3,077,545	-		MIT1002_02776	0.73	-0.9
3,077,560	-		MIT1002_02776	0.75	+2.6
3,077,588	-		MIT1002_02776	0.78	+0.2
3,077,749	+				-1.5
3,077,799	+				-0.2