Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02710

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
3,012,244	-		MIT1002_02708	0.83	-0.5
3,012,250	+		MIT1002_02708	0.84	-2.2
3,012,258	-		MIT1002_02708	0.84	-2.1
3,012,271	+		MIT1002_02708	0.86	-2.2
3,012,326	-				-3.0
3,012,419	-				-1.2
3,012,421	+				-3.7
3,012,421	+				-2.3
3,012,539	+				+0.5
3,012,586	-		MIT1002_02709	0.11	+0.8
3,012,588	+		MIT1002_02709	0.12	+1.0
3,012,588	+		MIT1002_02709	0.12	+1.4
3,012,588	+		MIT1002_02709	0.12	+0.5
3,012,596	-		MIT1002_02709	0.13	+0.6
3,012,596	-		MIT1002_02709	0.13	-0.6
3,012,596	-		MIT1002_02709	0.13	-0.6
3,012,610	+		MIT1002_02709	0.15	+0.2
3,012,612	+		MIT1002_02709	0.15	+0.1
3,012,618	-		MIT1002_02709	0.16	+1.1
3,012,618	-		MIT1002_02709	0.16	+0.2
3,012,620	-		MIT1002_02709	0.16	-0.2
3,012,690	-		MIT1002_02709	0.26	-1.8
3,012,690	-		MIT1002_02709	0.26	+1.7
3,012,703	+		MIT1002_02709	0.28	+1.3
3,012,708	+		MIT1002_02709	0.28	-0.0
3,012,716	-		MIT1002_02709	0.30	+0.6
3,012,718	+		MIT1002_02709	0.30	+1.6
3,012,726	-		MIT1002_02709	0.31	+0.1
3,012,817	-		MIT1002_02709	0.44	+0.0
3,012,903	+		MIT1002_02709	0.56	+1.4
3,012,940	+		MIT1002_02709	0.61	-0.2
3,012,967	+		MIT1002_02709	0.65	+2.6
3,012,967	+		MIT1002_02709	0.65	+0.7
3,012,975	-		MIT1002_02709	0.66	-0.7
3,012,975	-		MIT1002_02709	0.66	+1.0
3,012,975	-		MIT1002_02709	0.66	+3.9
3,013,046	+		MIT1002_02709	0.76	+0.4
3,013,056	+		MIT1002_02709	0.77	+1.8
3,013,056	+		MIT1002_02709	0.77	+0.4
3,013,056	+		MIT1002_02709	0.77	-1.5
3,013,056	+		MIT1002_02709	0.77	-0.8
3,013,056	+		MIT1002_02709	0.77	+0.1
3,013,056	+		MIT1002_02709	0.77	+2.0
3,013,064	-		MIT1002_02709	0.78	-0.6
3,013,064	-		MIT1002_02709	0.78	-1.8
3,013,064	-		MIT1002_02709	0.78	+0.9
3,013,064	-		MIT1002_02709	0.78	+1.7
3,013,066	-		MIT1002_02709	0.78	+0.9
3,013,081	-		MIT1002_02709	0.80	-1.6
3,013,143	-		MIT1002_02709	0.89	+1.4
3,013,154	-				+0.0
3,013,214	+				-1.8
3,013,222	-				+0.5
3,013,274	+				-1.5
3,013,300	-				+1.4
3,013,513	-		MIT1002_02710	0.33	-0.2
3,013,549	+		MIT1002_02710	0.38	+2.3
3,013,549	+		MIT1002_02710	0.38	-2.0
3,013,557	-		MIT1002_02710	0.39	+0.1
3,013,557	-		MIT1002_02710	0.39	+1.0
3,013,557	-		MIT1002_02710	0.39	+0.8
3,013,580	+		MIT1002_02710	0.42	-3.1
3,013,588	-		MIT1002_02710	0.43	-1.1
3,013,723	+		MIT1002_02710	0.59	+0.2
3,013,731	-		MIT1002_02710	0.60	+1.0
3,013,733	-		MIT1002_02710	0.60	-1.1
3,013,751	+		MIT1002_02710	0.62	+1.3
3,013,778	-		MIT1002_02710	0.66	+0.2
3,013,798	-		MIT1002_02710	0.68	+0.2
3,013,969	+		MIT1002_02710	0.89	+0.8
3,013,977	-				-2.3
3,013,983	+				+0.6
3,014,086	-				+0.6
3,014,107	+				-1.6