Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01713

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
1,901,641	+				-1.0
1,901,645	-				-2.6
1,901,649	-				-0.9
1,901,659	-				-0.3
1,901,735	+				+0.2
1,901,741	-				-0.3
1,901,807	-		MIT1002_01712	0.16	-1.2
1,901,892	-		MIT1002_01712	0.27	-1.2
1,901,915	+		MIT1002_01712	0.30	-0.1
1,901,915	+		MIT1002_01712	0.30	-0.8
1,901,993	-		MIT1002_01712	0.39	-2.5
1,902,000	+		MIT1002_01712	0.40	-0.4
1,902,017	+		MIT1002_01712	0.43	+0.2
1,902,023	-		MIT1002_01712	0.43	+0.4
1,902,025	-		MIT1002_01712	0.44	+1.0
1,902,025	-		MIT1002_01712	0.44	+2.1
1,902,075	-		MIT1002_01712	0.50	-0.0
1,902,075	-		MIT1002_01712	0.50	+1.8
1,902,124	+		MIT1002_01712	0.56	-2.0
1,902,144	+		MIT1002_01712	0.59	-0.9
1,902,160	+		MIT1002_01712	0.61	+0.6
1,902,181	-		MIT1002_01712	0.63	+1.5
1,902,284	-		MIT1002_01712	0.77	+1.0
1,902,284	-		MIT1002_01712	0.77	-0.2
1,902,295	+		MIT1002_01712	0.78	+0.0
1,902,402	+				-0.9
1,902,402	+				-0.7
1,902,409	-				+1.9
1,902,409	-				-0.3
1,902,410	-				-1.7
1,902,425	+				+0.5
1,902,433	-				-0.6
1,902,466	-				-1.1
1,902,494	+				+0.3
1,902,502	-				-0.9
1,902,538	-				-1.5
1,902,546	-				-2.7
1,902,659	+				-2.3
1,902,837	+		MIT1002_01713	0.13	+0.5
1,902,872	+		MIT1002_01713	0.15	-0.6
1,902,882	+		MIT1002_01713	0.15	+2.7
1,902,882	+		MIT1002_01713	0.15	-0.9
1,902,882	+		MIT1002_01713	0.15	-0.9
1,902,890	-		MIT1002_01713	0.15	+0.5
1,902,890	-		MIT1002_01713	0.15	+0.2
1,902,952	-		MIT1002_01713	0.18	+0.2
1,902,962	+		MIT1002_01713	0.18	-0.4
1,902,999	-		MIT1002_01713	0.20	+0.7
1,903,007	-		MIT1002_01713	0.20	-1.3
1,903,007	-		MIT1002_01713	0.20	-1.5
1,903,007	-		MIT1002_01713	0.20	-2.0
1,903,020	-		MIT1002_01713	0.21	+1.6
1,903,051	-		MIT1002_01713	0.22	-0.6
1,903,066	+		MIT1002_01713	0.23	-1.5
1,903,091	-		MIT1002_01713	0.24	+1.2
1,903,152	-		MIT1002_01713	0.27	-0.9
1,903,167	-		MIT1002_01713	0.27	-0.4
1,903,217	-		MIT1002_01713	0.29	+1.4
1,903,217	-		MIT1002_01713	0.29	-0.4
1,903,325	-		MIT1002_01713	0.34	+0.4
1,903,325	-		MIT1002_01713	0.34	-0.6
1,903,325	-		MIT1002_01713	0.34	-1.9
1,903,325	-		MIT1002_01713	0.34	-3.4
1,903,325	-		MIT1002_01713	0.34	-1.0
1,903,325	-		MIT1002_01713	0.34	-0.5
1,903,327	+		MIT1002_01713	0.34	-0.3
1,903,335	-		MIT1002_01713	0.35	-0.6
1,903,403	+		MIT1002_01713	0.37	+0.3
1,903,426	-		MIT1002_01713	0.38	-1.5
1,903,471	+		MIT1002_01713	0.40	-0.6
1,903,561	+		MIT1002_01713	0.44	-3.5
1,903,583	+		MIT1002_01713	0.45	-1.7
1,903,613	+		MIT1002_01713	0.46	-0.1
1,903,613	+		MIT1002_01713	0.46	-0.3
1,903,621	+		MIT1002_01713	0.47	-0.2
1,903,621	+		MIT1002_01713	0.47	-1.1
1,903,621	-		MIT1002_01713	0.47	+0.2
1,903,626	+		MIT1002_01713	0.47	-0.7
1,903,629	-		MIT1002_01713	0.47	+0.4
1,903,649	+		MIT1002_01713	0.48	-0.0
1,903,656	+		MIT1002_01713	0.48	-1.2
1,903,657	-		MIT1002_01713	0.48	-0.8
1,903,657	-		MIT1002_01713	0.48	-0.7
1,903,664	-		MIT1002_01713	0.49	+0.3
1,903,729	+		MIT1002_01713	0.51	+0.5
1,903,732	-		MIT1002_01713	0.52	-0.5
1,903,748	-		MIT1002_01713	0.52	-0.0
1,903,754	+		MIT1002_01713	0.53	-1.0
1,903,815	-		MIT1002_01713	0.55	+2.3
1,903,828	+		MIT1002_01713	0.56	-0.5
1,903,932	-		MIT1002_01713	0.60	+2.7
1,904,019	+		MIT1002_01713	0.64	-0.3
1,904,051	-		MIT1002_01713	0.65	+0.5
1,904,102	-		MIT1002_01713	0.68	+2.0
1,904,117	-		MIT1002_01713	0.68	+0.1
1,904,117	-		MIT1002_01713	0.68	-0.8
1,904,117	-		MIT1002_01713	0.68	-0.3
1,904,118	+		MIT1002_01713	0.68	-0.9
1,904,118	+		MIT1002_01713	0.68	+0.1
1,904,268	-		MIT1002_01713	0.75	+0.4
1,904,277	+		MIT1002_01713	0.75	+1.4
1,904,399	+		MIT1002_01713	0.80	-0.5
1,904,399	+		MIT1002_01713	0.80	-1.2
1,904,407	-		MIT1002_01713	0.81	+0.3
1,904,407	-		MIT1002_01713	0.81	-2.7
1,904,426	+		MIT1002_01713	0.81	-0.9
1,904,432	+		MIT1002_01713	0.82	-0.5
1,904,434	+		MIT1002_01713	0.82	+1.2
1,904,485	+		MIT1002_01713	0.84	+1.0
1,904,516	+		MIT1002_01713	0.85	+0.5
1,904,524	-		MIT1002_01713	0.86	+0.2
1,904,543	+		MIT1002_01713	0.86	-0.9
1,904,637	-				-0.0
1,904,689	-				-0.2
1,904,692	+				+1.3
1,904,692	+				+0.2
1,904,707	+				-0.5
1,904,713	+				-0.7
1,904,715	-				+0.9
1,904,727	-				+0.3
1,904,784	+				-1.4
1,904,784	+				-1.5
1,904,784	+				+0.9
1,904,787	-				-2.0
1,904,792	-				+1.4
1,904,792	-				-0.6
1,904,792	-				+1.5
1,904,794	+				-0.3
1,904,794	+				+1.4
1,904,794	+				-0.8
1,904,794	+				-0.2
1,904,794	+				+0.7
1,904,794	+				-0.0
1,904,831	+				-0.2
1,904,941	+				+0.3
1,904,976	-				+0.2
1,904,982	-				-0.8
1,904,983	-				-0.6
1,905,012	+				+0.3
1,905,044	+				+0.3
1,905,059	+				+1.0
1,905,062	-				+2.0
1,905,087	-				+0.3
1,905,250	-		MIT1002_01714	0.25	+0.3
1,905,292	-		MIT1002_01714	0.29	+0.6
1,905,292	-		MIT1002_01714	0.29	+1.3
1,905,340	+		MIT1002_01714	0.34	+0.3
1,905,348	-		MIT1002_01714	0.35	+0.9
1,905,365	+		MIT1002_01714	0.36	+1.0
1,905,422	+		MIT1002_01714	0.42	+0.1
1,905,450	-		MIT1002_01714	0.45	-0.7
1,905,545	+		MIT1002_01714	0.54	-0.2
1,905,548	+		MIT1002_01714	0.54	+1.7
1,905,741	-		MIT1002_01714	0.73	-3.0
1,905,798	+		MIT1002_01714	0.79	-3.1
1,905,798	+		MIT1002_01714	0.79	-0.0
1,905,833	+		MIT1002_01714	0.82	+0.1