Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01461

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
1,611,659	+				-0.5
1,611,714	+				-1.1
1,611,743	+				+0.6
1,611,935	+		MIT1002_01459	0.37	+0.2
1,611,996	-		MIT1002_01459	0.49	-0.9
1,612,037	-		MIT1002_01459	0.58	+0.7
1,612,136	-		MIT1002_01459	0.78	+0.3
1,612,169	-		MIT1002_01459	0.85	+2.4
1,612,180	-		MIT1002_01459	0.87	+1.3
1,612,205	+				-0.3
1,612,213	-				-0.0
1,612,406	+		MIT1002_01460	0.29	-0.9
1,612,416	+		MIT1002_01460	0.35	-2.1
1,612,456	-		MIT1002_01460	0.63	+1.2
1,612,516	-				-0.2
1,612,529	-				+1.0
1,612,561	-				-1.2
1,612,561	-				-0.6
1,612,578	-				+0.4
1,612,630	+				+0.3
1,612,657	-				+0.5
1,612,684	+				-0.5
1,612,719	+				+0.6
1,612,808	-		MIT1002_01461	0.16	+1.2
1,612,945	+		MIT1002_01461	0.26	+0.6
1,613,046	+		MIT1002_01461	0.34	+0.1
1,613,059	+		MIT1002_01461	0.35	-1.7
1,613,071	+		MIT1002_01461	0.36	-1.4
1,613,077	-		MIT1002_01461	0.37	+0.3
1,613,077	-		MIT1002_01461	0.37	+0.4
1,613,107	-		MIT1002_01461	0.39	-0.8
1,613,173	+		MIT1002_01461	0.44	-1.8
1,613,204	-		MIT1002_01461	0.47	-1.3
1,613,220	-		MIT1002_01461	0.48	+2.3
1,613,236	+		MIT1002_01461	0.49	+2.4
1,613,328	+		MIT1002_01461	0.57	-2.4
1,613,336	-		MIT1002_01461	0.57	+0.1
1,613,370	-		MIT1002_01461	0.60	-1.5
1,613,529	+		MIT1002_01461	0.73	-0.8
1,613,531	+		MIT1002_01461	0.73	-0.3
1,613,539	-		MIT1002_01461	0.73	-2.8
1,613,539	-		MIT1002_01461	0.73	-0.3
1,613,541	+		MIT1002_01461	0.74	+0.0
1,613,541	+		MIT1002_01461	0.74	+0.6
1,613,541	-		MIT1002_01461	0.74	-0.3
1,613,549	-		MIT1002_01461	0.74	+2.1
1,613,549	-		MIT1002_01461	0.74	+0.1
1,613,551	+		MIT1002_01461	0.74	+0.3
1,613,559	-		MIT1002_01461	0.75	+1.5
1,613,564	-		MIT1002_01461	0.75	-1.4
1,613,684	+		MIT1002_01461	0.85	-0.9
1,613,769	+				-0.7
1,613,803	+				+0.3
1,613,808	+				+0.1
1,613,808	+				-1.1
1,613,811	-				-1.2
1,613,818	-				+1.4
1,613,818	-				-0.7
1,613,825	+				-0.7
1,613,895	-				+1.2
1,613,895	-				-1.4
1,613,966	-				+1.1
1,614,141	-				+0.9
1,614,183	+				-1.3
1,614,183	+				+1.7
1,614,286	-				-1.6
1,614,375	-				-0.8
1,614,387	+				-2.2
1,614,419	-				+0.9
1,614,421	+				+1.7
1,614,421	+				-1.3
1,614,421	+				+0.7
1,614,429	-				+0.1
1,614,429	-				+0.2
1,614,489	-		MIT1002_01462	0.12	-0.0
1,614,555	+		MIT1002_01462	0.14	-0.3
1,614,555	+		MIT1002_01462	0.14	-2.1
1,614,555	+		MIT1002_01462	0.14	-0.1
1,614,555	+		MIT1002_01462	0.14	+1.6
1,614,556	-		MIT1002_01462	0.15	+2.0
1,614,563	-		MIT1002_01462	0.15	-1.2
1,614,563	-		MIT1002_01462	0.15	-0.0
1,614,570	-		MIT1002_01462	0.15	+1.8
1,614,575	-		MIT1002_01462	0.15	-0.3
1,614,671	-		MIT1002_01462	0.19	+2.1
1,614,732	+		MIT1002_01462	0.21	-1.2
1,614,736	+		MIT1002_01462	0.21	-0.7
1,614,736	+		MIT1002_01462	0.21	+0.3
1,614,779	-		MIT1002_01462	0.23	+0.5
1,614,849	-		MIT1002_01462	0.26	+0.5
1,614,849	-		MIT1002_01462	0.26	+0.0