Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01340

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
1,485,327	+		MIT1002_01340	0.21	-2.6
1,485,497	+		MIT1002_01340	0.43	-2.1
1,485,500	-		MIT1002_01340	0.43	+1.0
1,485,502	+		MIT1002_01340	0.43	-0.8
1,485,505	-		MIT1002_01340	0.44	-2.8
1,485,514	+		MIT1002_01340	0.45	-1.7
1,485,517	-		MIT1002_01340	0.45	-2.7
1,485,517	-		MIT1002_01340	0.45	-1.4
1,485,553	+		MIT1002_01340	0.50	-1.3
1,485,554	+		MIT1002_01340	0.50	+0.2
1,485,562	-		MIT1002_01340	0.51	-2.1
1,485,678	+		MIT1002_01340	0.65	-1.0
1,485,718	-		MIT1002_01340	0.70	-1.4
1,485,718	-		MIT1002_01340	0.70	-2.4
1,485,752	-		MIT1002_01340	0.75	-1.4
1,485,854	+		MIT1002_01340	0.87	+1.8
1,485,857	+		MIT1002_01340	0.88	+0.5
1,485,867	-		MIT1002_01340	0.89	-0.7
1,486,317	-				-0.9
1,486,595	-				-1.0
1,486,641	+				-0.8
1,486,646	+				+1.7
1,486,646	+				+0.3
1,486,646	+				-1.4
1,486,646	+				+0.1
1,486,654	-				-1.0
1,486,654	-				-2.0
1,486,682	-				+0.1
1,486,705	-				+1.6
1,486,747	-				+0.1