Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01170

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 5
1,285,957	+		MIT1002_01169	0.58	+1.2
1,285,974	+		MIT1002_01169	0.59	-1.3
1,285,980	-		MIT1002_01169	0.59	+1.8
1,286,038	-		MIT1002_01169	0.62	+1.0
1,286,048	+		MIT1002_01169	0.62	-0.1
1,286,064	-		MIT1002_01169	0.63	-0.6
1,286,079	-		MIT1002_01169	0.64	+1.3
1,286,142	+		MIT1002_01169	0.67	+2.0
1,286,155	+		MIT1002_01169	0.67	-0.2
1,286,282	-		MIT1002_01169	0.73	-0.7
1,286,307	-		MIT1002_01169	0.74	+2.1
1,286,325	-		MIT1002_01169	0.75	+3.7
1,286,325	-		MIT1002_01169	0.75	-0.6
1,286,396	+		MIT1002_01169	0.78	-0.0
1,286,459	+		MIT1002_01169	0.81	-0.2
1,286,459	+		MIT1002_01169	0.81	-0.4
1,286,467	-		MIT1002_01169	0.81	-2.6
1,286,476	-		MIT1002_01169	0.81	-1.0
1,286,503	+		MIT1002_01169	0.83	-1.5
1,286,508	+		MIT1002_01169	0.83	+1.3
1,286,581	+		MIT1002_01169	0.86	-1.7
1,286,628	+		MIT1002_01169	0.88	+0.2
1,286,636	-		MIT1002_01169	0.88	+1.4
1,286,699	-				-0.7
1,286,720	-				-1.0
1,286,724	+				-0.3
1,286,724	+				+1.9
1,286,807	-				-0.4
1,286,893	-				+0.3
1,286,949	-				-0.6
1,286,974	+				-1.5
1,286,974	+				+3.8
1,287,068	+		MIT1002_01170	0.26	-0.8
1,287,084	-		MIT1002_01170	0.30	-0.3
1,287,142	+		MIT1002_01170	0.43	+0.5
1,287,176	+		MIT1002_01170	0.51	-1.1
1,287,197	+		MIT1002_01170	0.56	+0.6
1,287,200	-		MIT1002_01170	0.57	-0.1
1,287,271	+		MIT1002_01170	0.74	-0.3
1,287,377	+				-0.4
1,287,385	-				+2.1
1,287,398	+				+2.1
1,287,398	+				+0.3
1,287,429	-				+0.6
1,287,444	+				-0.0
1,287,456	+				-0.0
1,287,464	-				+0.0
1,287,464	-				+0.1
1,287,497	+				-2.4
1,287,497	+				+0.8
1,287,505	-				-0.5
1,287,507	+				+0.6
1,287,512	+				-0.6
1,287,519	+				-1.3
1,287,519	+				+1.1
1,287,520	-				-0.1
1,287,527	-				+1.6
1,287,527	-				+1.1
1,287,527	-				-0.9
1,287,564	+				+0.7
1,287,565	+				+1.2
1,287,572	-				+0.2
1,287,610	-				-0.0
1,287,722	-				+0.9
1,287,837	-				+1.1
1,287,890	-		MIT1002_01172	0.10	+3.1
1,287,894	+		MIT1002_01172	0.11	+2.2
1,287,894	+		MIT1002_01172	0.11	+1.4
1,287,894	+		MIT1002_01172	0.11	-0.7
1,287,902	-		MIT1002_01172	0.11	-0.1
1,287,902	-		MIT1002_01172	0.11	+0.7
1,287,964	+		MIT1002_01172	0.14	+0.6
1,287,972	-		MIT1002_01172	0.14	-0.8
1,287,972	-		MIT1002_01172	0.14	-0.5
1,287,972	-		MIT1002_01172	0.14	-0.1
1,287,972	-		MIT1002_01172	0.14	-0.4
1,288,098	+		MIT1002_01172	0.20	+0.6
1,288,106	-		MIT1002_01172	0.21	+0.7
1,288,107	+		MIT1002_01172	0.21	-1.4
1,288,107	+		MIT1002_01172	0.21	-2.6
1,288,115	-		MIT1002_01172	0.21	-1.4
1,288,115	-		MIT1002_01172	0.21	+0.1
1,288,117	-		MIT1002_01172	0.21	+0.6
1,288,139	+		MIT1002_01172	0.22	+1.1
1,288,140	+		MIT1002_01172	0.22	-1.8
1,288,148	-		MIT1002_01172	0.23	+1.1
1,288,191	-		MIT1002_01172	0.25	+0.2
1,288,197	+		MIT1002_01172	0.25	-0.3
1,288,211	+		MIT1002_01172	0.26	-0.5
1,288,262	-		MIT1002_01172	0.28	-0.1
1,288,352	-		MIT1002_01172	0.33	+0.7
1,288,358	+		MIT1002_01172	0.33	+0.6
1,288,376	-		MIT1002_01172	0.34	+0.3
1,288,378	+		MIT1002_01172	0.34	-2.4