Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03972

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
4,457,356	+		MIT1002_03971	0.69	+0.1
4,457,364	-		MIT1002_03971	0.69	+0.4
4,457,525	+		MIT1002_03971	0.76	-0.8
4,457,558	+		MIT1002_03971	0.77	+0.6
4,457,558	+		MIT1002_03971	0.77	-0.1
4,457,566	-		MIT1002_03971	0.78	-1.9
4,457,601	-		MIT1002_03971	0.79	+0.1
4,457,602	-		MIT1002_03971	0.79	-0.7
4,457,607	-		MIT1002_03971	0.79	-0.3
4,457,609	+		MIT1002_03971	0.80	-0.3
4,457,724	+		MIT1002_03971	0.84	+0.7
4,457,745	+		MIT1002_03971	0.85	-1.2
4,457,901	-				+1.2
4,457,903	+				-1.4
4,457,911	-				+0.1
4,457,990	+				+0.3
4,458,165	+				-1.1
4,458,165	-				-0.8
4,458,302	+				-0.3
4,458,307	+				-0.2
4,458,317	+				-0.4
4,458,338	+				-1.1
4,458,381	+				-1.2
4,458,483	-		MIT1002_03972	0.10	-0.6
4,458,492	+		MIT1002_03972	0.11	-2.4
4,458,573	+		MIT1002_03972	0.16	+0.3
4,458,663	-		MIT1002_03972	0.22	-0.2
4,458,673	-		MIT1002_03972	0.22	+0.2
4,458,714	-		MIT1002_03972	0.25	-0.9
4,458,725	-		MIT1002_03972	0.26	-0.0
4,458,796	-		MIT1002_03972	0.30	-0.6
4,458,796	-		MIT1002_03972	0.30	-1.1
4,458,827	-		MIT1002_03972	0.32	-2.4
4,458,955	+		MIT1002_03972	0.40	-0.3
4,458,958	-		MIT1002_03972	0.41	+0.0
4,458,981	+		MIT1002_03972	0.42	-0.5
4,458,989	-		MIT1002_03972	0.43	+0.9
4,459,025	+		MIT1002_03972	0.45	-0.6
4,459,125	+		MIT1002_03972	0.51	-0.7
4,459,128	-		MIT1002_03972	0.52	-1.2
4,459,183	+		MIT1002_03972	0.55	+0.6
4,459,204	-		MIT1002_03972	0.56	-0.4
4,459,205	+		MIT1002_03972	0.56	-0.4
4,459,205	+		MIT1002_03972	0.56	+0.4
4,459,213	-		MIT1002_03972	0.57	-0.3
4,459,242	+		MIT1002_03972	0.59	-1.3
4,459,260	-		MIT1002_03972	0.60	+1.0
4,459,260	-		MIT1002_03972	0.60	-0.3
4,459,260	-		MIT1002_03972	0.60	+1.9
4,459,260	-		MIT1002_03972	0.60	+0.7
4,459,288	+		MIT1002_03972	0.62	+0.2
4,459,315	+		MIT1002_03972	0.64	+0.2
4,459,338	-		MIT1002_03972	0.65	-0.7
4,459,338	-		MIT1002_03972	0.65	-0.7
4,459,390	+		MIT1002_03972	0.68	-0.8
4,459,464	-		MIT1002_03972	0.73	-0.8
4,459,546	+		MIT1002_03972	0.78	-1.4
4,459,565	-		MIT1002_03972	0.80	+2.9
4,459,567	+		MIT1002_03972	0.80	+0.5
4,459,575	-		MIT1002_03972	0.80	-0.4
4,459,603	+		MIT1002_03972	0.82	-0.3
4,459,621	+		MIT1002_03972	0.83	-0.5
4,459,629	-		MIT1002_03972	0.84	-1.7
4,459,629	-		MIT1002_03972	0.84	-1.1
4,459,655	+		MIT1002_03972	0.85	-0.6
4,459,691	+		MIT1002_03972	0.88	-0.1
4,459,782	-				-1.4
4,459,820	+				-0.9
4,459,895	-				-1.3
4,459,953	+				+0.9
4,460,195	+				+0.9
4,460,203	-				+0.5
4,460,335	-				+0.0
4,460,343	-				-0.7
4,460,363	+				+0.1
4,460,366	+				+1.0
4,460,382	-				-1.5
4,460,504	-		MIT1002_03973	0.19	-0.7
4,460,506	+		MIT1002_03973	0.20	-1.2
4,460,506	+		MIT1002_03973	0.20	+0.1
4,460,514	-		MIT1002_03973	0.20	+2.9
4,460,514	-		MIT1002_03973	0.20	+1.5
4,460,559	-		MIT1002_03973	0.25	-0.3
4,460,567	-		MIT1002_03973	0.26	-0.1
4,460,614	+		MIT1002_03973	0.32	-0.8
4,460,638	+		MIT1002_03973	0.34	+1.3
4,460,724	-		MIT1002_03973	0.44	-1.0
4,460,799	-		MIT1002_03973	0.52	+0.8
4,460,834	-		MIT1002_03973	0.56	-0.2
4,460,851	+		MIT1002_03973	0.58	-1.4
4,460,862	+		MIT1002_03973	0.59	+1.0
4,460,866	+		MIT1002_03973	0.60	-0.9
4,460,874	-		MIT1002_03973	0.60	-1.4
4,460,874	-		MIT1002_03973	0.60	+0.3
4,460,874	-		MIT1002_03973	0.60	-1.4