Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03883

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
4,346,817	+		MIT1002_03881	0.56	-2.0
4,346,865	-		MIT1002_03881	0.64	+0.2
4,346,880	+		MIT1002_03881	0.67	+0.3
4,346,880	+		MIT1002_03881	0.67	-1.0
4,346,942	+		MIT1002_03881	0.78	+1.0
4,347,051	+				+0.8
4,347,051	+				+0.6
4,347,059	-				-1.5
4,347,061	+				+2.0
4,347,125	-				+0.2
4,347,159	-		MIT1002_03882	0.15	-0.0
4,347,307	+		MIT1002_03882	0.61	-0.6
4,347,307	+		MIT1002_03882	0.61	-0.6
4,347,315	+		MIT1002_03882	0.63	+1.6
4,347,315	+		MIT1002_03882	0.63	-1.7
4,347,315	-		MIT1002_03882	0.63	+1.0
4,347,345	+		MIT1002_03882	0.73	+1.2
4,347,353	-		MIT1002_03882	0.75	+0.0
4,347,353	-		MIT1002_03882	0.75	+0.4
4,347,353	-		MIT1002_03882	0.75	+1.1
4,347,353	-		MIT1002_03882	0.75	-2.5
4,347,371	+		MIT1002_03882	0.81	+1.5
4,347,408	-				-1.8
4,347,435	+				+0.9
4,347,443	-				-1.7
4,347,443	-				+0.2
4,347,443	-				+2.6
4,347,443	-				+1.1
4,347,446	+				+0.6
4,347,729	+				+1.1
4,347,769	-				+0.8
4,347,769	-				+1.0
4,347,769	-				+0.6
4,347,818	+				+1.0
4,347,818	+				+0.9
4,347,818	+				+1.8
4,347,826	-				-0.8
4,347,885	-		MIT1002_03883	0.15	+0.6
4,347,887	+		MIT1002_03883	0.16	+1.6
4,347,895	-		MIT1002_03883	0.17	+0.2
4,347,928	-		MIT1002_03883	0.23	+1.4
4,347,928	-		MIT1002_03883	0.23	+1.3
4,347,952	-		MIT1002_03883	0.28	+0.4
4,347,998	-		MIT1002_03883	0.37	-1.6
4,348,060	+		MIT1002_03883	0.48	-1.2
4,348,067	-		MIT1002_03883	0.50	-0.8
4,348,067	-		MIT1002_03883	0.50	-0.6
4,348,076	-		MIT1002_03883	0.52	+0.7
4,348,297	+				+0.3
4,348,361	+				+0.5
4,348,361	+				+0.0
4,348,361	+				-1.0
4,348,367	+				-2.2
4,348,367	+				-1.0
4,348,375	-				+0.0
4,348,375	-				+0.2
4,348,392	-				-2.6
4,348,398	-				-0.1
4,348,439	+		MIT1002_03884	0.15	-1.4
4,348,468	+		MIT1002_03884	0.20	+2.0
4,348,476	-		MIT1002_03884	0.22	-1.6
4,348,478	+		MIT1002_03884	0.22	-0.2
4,348,479	+		MIT1002_03884	0.22	-0.9
4,348,545	-		MIT1002_03884	0.34	+0.8
4,348,600	-		MIT1002_03884	0.43	+0.8
4,348,614	+		MIT1002_03884	0.46	+0.1
4,348,614	+		MIT1002_03884	0.46	-0.4
4,348,614	-		MIT1002_03884	0.46	+0.7
4,348,622	-		MIT1002_03884	0.47	+0.2
4,348,622	-		MIT1002_03884	0.47	+0.1
4,348,622	-		MIT1002_03884	0.47	-0.1
4,348,622	-		MIT1002_03884	0.47	-0.6
4,348,646	+		MIT1002_03884	0.51	+0.2
4,348,696	+		MIT1002_03884	0.60	+1.4
4,348,785	+		MIT1002_03884	0.76	+0.0
4,348,785	-		MIT1002_03884	0.76	+1.0
4,348,785	-		MIT1002_03884	0.76	+0.0
4,348,802	+		MIT1002_03884	0.79	+0.6
4,348,815	+		MIT1002_03884	0.81	+0.1
4,348,886	+				+0.0
4,348,894	-				-0.2
4,348,899	+				-0.9
4,349,018	-				-3.5
4,349,018	-				-4.1
4,349,057	-				-3.5
4,349,101	-				-1.8
4,349,152	+		MIT1002_03885	0.12	-2.0
4,349,160	-		MIT1002_03885	0.13	-4.0
4,349,173	+		MIT1002_03885	0.14	-4.2
4,349,173	+		MIT1002_03885	0.14	-2.8
4,349,181	-		MIT1002_03885	0.14	-3.0
4,349,181	-		MIT1002_03885	0.14	-3.4
4,349,188	+		MIT1002_03885	0.15	-0.5
4,349,254	+		MIT1002_03885	0.20	-4.4