Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03604

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
4,024,293	+		MIT1002_03603	0.58	-0.5
4,024,317	-		MIT1002_03603	0.59	+0.3
4,024,317	-		MIT1002_03603	0.59	+1.1
4,024,351	+		MIT1002_03603	0.62	+0.3
4,024,475	+		MIT1002_03603	0.71	+0.4
4,024,483	-		MIT1002_03603	0.71	+0.6
4,024,596	+		MIT1002_03603	0.79	+0.1
4,024,654	-		MIT1002_03603	0.83	+0.9
4,024,688	-		MIT1002_03603	0.86	-0.4
4,024,688	-		MIT1002_03603	0.86	+2.2
4,024,710	+		MIT1002_03603	0.87	+0.4
4,024,744	-		MIT1002_03603	0.90	-0.9
4,024,800	+				+0.8
4,024,807	+				-0.9
4,024,838	+				+0.6
4,024,838	+				-0.9
4,024,846	-				+0.8
4,024,846	-				+1.7
4,024,896	+				+0.4
4,024,918	+				+0.5
4,024,936	-				-1.6
4,024,947	+				-0.7
4,024,947	+				+0.6
4,024,947	+				+0.1
4,024,947	+				-0.9
4,024,947	+				-0.6
4,024,955	-				-0.7
4,024,955	-				-0.0
4,024,955	-				+0.6
4,024,955	-				-0.1
4,024,957	+				+0.9
4,024,965	-				+0.1
4,024,965	-				+0.1
4,024,973	+				+0.9
4,024,978	+				-0.9
4,024,981	-				-3.3
4,025,017	+				+0.1
4,025,025	-				+0.1
4,025,064	+				+1.3
4,025,102	-				+0.4
4,025,163	+				-0.1
4,025,163	+				+0.1
4,025,163	+				-0.9
4,025,163	+				+0.6
4,025,171	-				+0.1
4,025,171	-				-0.8
4,025,171	-				+0.6
4,025,171	-				+0.5
4,025,171	-				+0.3
4,025,171	-				-1.3
4,025,175	+				+1.0
4,025,175	+				-1.6
4,025,175	+				+0.5
4,025,175	+				-0.4
4,025,175	+				+0.7
4,025,175	+				+0.6
4,025,183	-				+1.7
4,025,183	-				+0.1
4,025,183	-				+0.8
4,025,183	-				-1.5
4,025,183	-				-0.2
4,025,183	-				-0.3
4,025,183	-				+1.5
4,025,183	-				+0.6
4,025,183	-				+0.1
4,025,183	-				+0.9
4,025,183	-				-2.5
4,025,318	+				+0.9
4,025,369	+		MIT1002_03604	0.10	+0.5
4,025,369	+		MIT1002_03604	0.10	+0.1
4,025,377	-		MIT1002_03604	0.11	+0.9
4,025,379	+		MIT1002_03604	0.11	-0.6
4,025,386	-		MIT1002_03604	0.11	-1.6
4,025,387	+		MIT1002_03604	0.11	-3.8
4,025,387	+		MIT1002_03604	0.11	+0.2
4,025,411	+		MIT1002_03604	0.13	-0.6
4,025,419	-		MIT1002_03604	0.13	-2.1
4,025,445	-		MIT1002_03604	0.15	-0.1
4,025,445	-		MIT1002_03604	0.15	-0.1
4,025,507	+		MIT1002_03604	0.19	+0.1
4,025,507	+		MIT1002_03604	0.19	+1.6
4,025,507	+		MIT1002_03604	0.19	-0.3
4,025,515	-		MIT1002_03604	0.19	+1.0
4,025,542	+		MIT1002_03604	0.21	-0.3
4,025,554	+		MIT1002_03604	0.21	+2.1
4,025,593	-		MIT1002_03604	0.24	-0.9
4,025,593	-		MIT1002_03604	0.24	-1.9
4,025,599	+		MIT1002_03604	0.24	+0.1
4,025,599	+		MIT1002_03604	0.24	-0.3
4,025,625	+		MIT1002_03604	0.26	-0.4
4,025,625	+		MIT1002_03604	0.26	-0.9
4,025,625	+		MIT1002_03604	0.26	+1.2
4,025,625	+		MIT1002_03604	0.26	+0.5
4,025,679	+		MIT1002_03604	0.29	+0.4
4,025,692	+		MIT1002_03604	0.30	+1.2
4,025,699	-		MIT1002_03604	0.30	+0.5
4,025,700	-		MIT1002_03604	0.30	-0.1
4,025,716	+		MIT1002_03604	0.31	+1.0
4,025,716	+		MIT1002_03604	0.31	-0.5
4,025,745	-		MIT1002_03604	0.33	+1.4
4,025,774	+		MIT1002_03604	0.35	+1.2
4,025,783	+		MIT1002_03604	0.35	-0.7
4,025,786	-		MIT1002_03604	0.35	+0.3
4,025,791	-		MIT1002_03604	0.36	+2.1
4,025,796	-		MIT1002_03604	0.36	+0.7
4,025,896	+		MIT1002_03604	0.42	+1.1
4,025,896	+		MIT1002_03604	0.42	+0.9
4,025,896	+		MIT1002_03604	0.42	+0.4
4,025,896	+		MIT1002_03604	0.42	-0.7
4,025,896	+		MIT1002_03604	0.42	-1.7
4,025,896	+		MIT1002_03604	0.42	+0.2
4,025,896	+		MIT1002_03604	0.42	+0.3
4,025,896	+		MIT1002_03604	0.42	-0.6
4,025,896	+		MIT1002_03604	0.42	-1.1
4,025,896	+		MIT1002_03604	0.42	+0.1
4,025,896	+		MIT1002_03604	0.42	-0.1
4,025,896	+		MIT1002_03604	0.42	-0.3
4,025,896	+		MIT1002_03604	0.42	+1.7
4,025,896	+		MIT1002_03604	0.42	+1.1
4,025,904	-		MIT1002_03604	0.42	+1.6
4,025,904	-		MIT1002_03604	0.42	+1.6
4,025,904	-		MIT1002_03604	0.42	+1.1
4,025,904	-		MIT1002_03604	0.42	-1.5
4,025,904	-		MIT1002_03604	0.42	-2.6
4,025,904	-		MIT1002_03604	0.42	+0.9
4,025,904	-		MIT1002_03604	0.42	+0.5
4,025,904	-		MIT1002_03604	0.42	-0.6
4,025,904	-		MIT1002_03604	0.42	+0.7
4,025,904	-		MIT1002_03604	0.42	+0.0
4,025,904	-		MIT1002_03604	0.42	+1.4
4,025,904	-		MIT1002_03604	0.42	-0.3
4,025,964	+		MIT1002_03604	0.46	+1.7
4,026,046	+		MIT1002_03604	0.51	-1.5
4,026,046	+		MIT1002_03604	0.51	-1.2
4,026,058	-		MIT1002_03604	0.52	+1.2
4,026,138	-		MIT1002_03604	0.56	+0.8
4,026,170	+		MIT1002_03604	0.58	+0.3
4,026,211	+		MIT1002_03604	0.61	+0.0
4,026,230	-		MIT1002_03604	0.62	-0.1
4,026,273	+		MIT1002_03604	0.64	-0.6
4,026,278	+		MIT1002_03604	0.65	+1.3
4,026,302	-		MIT1002_03604	0.66	-0.5
4,026,312	-		MIT1002_03604	0.67	+1.6
4,026,375	+		MIT1002_03604	0.71	+3.6
4,026,382	+		MIT1002_03604	0.71	-0.9
4,026,390	-		MIT1002_03604	0.71	-0.4
4,026,390	-		MIT1002_03604	0.71	-0.5
4,026,400	+		MIT1002_03604	0.72	+0.3
4,026,427	-		MIT1002_03604	0.74	-0.3
4,026,427	-		MIT1002_03604	0.74	+0.7
4,026,451	+		MIT1002_03604	0.75	+0.4
4,026,461	+		MIT1002_03604	0.76	-1.8
4,026,474	-		MIT1002_03604	0.76	+1.3
4,026,482	-		MIT1002_03604	0.77	-0.2
4,026,490	+		MIT1002_03604	0.77	+0.1
4,026,605	-		MIT1002_03604	0.84	-0.8
4,026,611	-		MIT1002_03604	0.85	-0.4
4,026,611	-		MIT1002_03604	0.85	+0.3
4,026,624	+		MIT1002_03604	0.85	+0.1
4,026,624	+		MIT1002_03604	0.85	-1.7
4,026,650	-		MIT1002_03604	0.87	+0.5
4,026,675	+		MIT1002_03604	0.89	-0.3
4,026,688	-		MIT1002_03604	0.89	+1.3
4,026,767	-				-2.6
4,026,782	+				-1.9
4,026,795	+				-0.1
4,026,802	-				+0.5
4,026,809	-				-1.4
4,026,821	-				+1.3
4,026,821	-				-0.2
4,026,854	+				+0.2
4,026,908	+				-0.5
4,026,908	+				+0.3
4,026,916	-				+0.3
4,026,916	-				+0.9
4,026,937	-				-1.1
4,026,952	-				+0.2
4,026,954	+				+1.8
4,026,954	+				-0.2
4,026,960	+				-2.2
4,026,961	+				-0.9
4,026,961	+				-2.7
4,026,961	+				-1.9
4,026,969	-				-0.2
4,026,974	-				-0.6
4,027,006	+				-0.8
4,027,081	-				+0.5
4,027,104	-				+0.1
4,027,108	+				-0.3
4,027,108	+				+0.4
4,027,108	+				+0.1
4,027,109	+				+0.0
4,027,116	-				-0.1
4,027,116	-				+0.6
4,027,117	-				+0.2
4,027,117	-				-0.9
4,027,166	+				-2.0
4,027,174	-				+0.0
4,027,209	-				-0.8
4,027,209	-				-0.6
4,027,309	+				-1.5
4,027,324	-				+0.2
4,027,393	+				-1.4
4,027,393	+				-1.7
4,027,393	+				+0.2
4,027,405	+				+0.1
4,027,405	+				-3.0
4,027,420	-				-0.9
4,027,443	-				-0.1
4,027,505	+		MIT1002_03605	0.17	-1.8
4,027,514	-		MIT1002_03605	0.18	-0.5
4,027,636	-		MIT1002_03605	0.35	-1.6
4,027,643	-		MIT1002_03605	0.36	-2.1
4,027,678	-		MIT1002_03605	0.40	-1.7
4,027,683	+		MIT1002_03605	0.41	+1.8
4,027,704	-		MIT1002_03605	0.44	-0.5
4,027,746	-		MIT1002_03605	0.50	-0.4
4,027,753	+		MIT1002_03605	0.50	+0.6
4,027,753	+		MIT1002_03605	0.50	-0.5
4,027,753	+		MIT1002_03605	0.50	-0.4
4,027,759	-		MIT1002_03605	0.51	-0.5
4,027,761	-		MIT1002_03605	0.52	-2.4
4,027,761	-		MIT1002_03605	0.52	-2.2
4,027,767	+		MIT1002_03605	0.52	+0.3
4,027,823	+		MIT1002_03605	0.60	+0.5
4,027,831	-		MIT1002_03605	0.61	-0.8
4,027,866	+		MIT1002_03605	0.66	-0.5