Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03581

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
4,008,761	-				-0.6
4,008,834	+				-1.6
4,008,895	-		MIT1002_03581	0.10	-1.3
4,008,939	+		MIT1002_03581	0.13	-1.3
4,008,957	+		MIT1002_03581	0.15	-2.2
4,008,965	-		MIT1002_03581	0.15	-0.5
4,008,969	+		MIT1002_03581	0.15	-3.6
4,009,062	+		MIT1002_03581	0.22	-0.7
4,009,089	-		MIT1002_03581	0.24	-1.7
4,009,124	+		MIT1002_03581	0.27	-0.9
4,009,125	-		MIT1002_03581	0.27	-2.6
4,009,154	-		MIT1002_03581	0.29	-0.9
4,009,259	+		MIT1002_03581	0.36	-2.3
4,009,301	-		MIT1002_03581	0.39	-0.7
4,009,328	+		MIT1002_03581	0.41	-0.3
4,009,338	+		MIT1002_03581	0.42	-1.6
4,009,346	-		MIT1002_03581	0.42	-1.7
4,009,361	+		MIT1002_03581	0.43	-2.7
4,009,513	-		MIT1002_03581	0.54	-1.7
4,009,515	-		MIT1002_03581	0.54	-0.9
4,009,548	+		MIT1002_03581	0.57	-3.3
4,009,554	-		MIT1002_03581	0.57	-2.8
4,009,702	+		MIT1002_03581	0.68	-3.0
4,009,702	+		MIT1002_03581	0.68	-2.8
4,009,702	+		MIT1002_03581	0.68	-0.7
4,009,710	-		MIT1002_03581	0.68	-1.3
4,009,710	-		MIT1002_03581	0.68	-1.1
4,009,710	-		MIT1002_03581	0.68	-2.7
4,009,741	+		MIT1002_03581	0.70	-0.3
4,009,753	+		MIT1002_03581	0.71	-1.5
4,009,756	-		MIT1002_03581	0.71	-0.9
4,009,756	-		MIT1002_03581	0.71	-4.0
4,009,856	+		MIT1002_03581	0.79	-1.8
4,009,870	+		MIT1002_03581	0.80	-2.9
4,009,878	-		MIT1002_03581	0.80	-4.6
4,010,145	-				-3.3
4,010,230	+				-0.9
4,010,231	-				+0.6
4,010,231	-				-0.8
4,010,256	+				-0.6
4,010,330	-				+0.7
4,010,330	-				-0.3
4,010,330	-				+0.1
4,010,330	-				-0.0
4,010,346	+				-1.2
4,010,410	-				+0.5
4,010,454	+				-1.6
4,010,459	+				-1.4
4,010,494	-				-0.4
4,010,496	+				-0.2
4,010,501	-				-0.3
4,010,517	-		MIT1002_03582	0.10	+0.9
4,010,681	+		MIT1002_03582	0.22	+1.1
4,010,732	-		MIT1002_03582	0.26	+0.3
4,010,735	+		MIT1002_03582	0.26	-1.5
4,010,813	-		MIT1002_03582	0.32	+0.4
4,010,813	-		MIT1002_03582	0.32	-0.6
4,010,991	+		MIT1002_03582	0.45	+0.1
4,011,023	-		MIT1002_03582	0.48	+1.0
4,011,050	+		MIT1002_03582	0.50	+0.4
4,011,145	-		MIT1002_03582	0.57	+0.6
4,011,149	+		MIT1002_03582	0.57	+0.4
4,011,157	+		MIT1002_03582	0.57	+0.2