Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03530

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
3,948,579	+		MIT1002_03528	0.80	+0.6
3,948,603	+		MIT1002_03528	0.84	+0.1
3,948,722	+				+0.6
3,948,722	+				+0.6
3,948,769	-				-0.4
3,948,879	-		MIT1002_03529	0.13	+0.3
3,948,893	+		MIT1002_03529	0.15	+0.2
3,948,906	-		MIT1002_03529	0.17	-0.3
3,948,906	-		MIT1002_03529	0.17	+0.5
3,948,920	-		MIT1002_03529	0.20	-1.1
3,948,995	+		MIT1002_03529	0.32	+0.8
3,949,030	+		MIT1002_03529	0.38	+0.9
3,949,035	+		MIT1002_03529	0.38	+0.1
3,949,035	+		MIT1002_03529	0.38	+2.1
3,949,144	-		MIT1002_03529	0.56	-0.3
3,949,170	+		MIT1002_03529	0.60	-0.5
3,949,199	+		MIT1002_03529	0.65	+0.6
3,949,207	-		MIT1002_03529	0.66	-0.3
3,949,222	-		MIT1002_03529	0.69	-0.3
3,949,312	+		MIT1002_03529	0.83	-0.0
3,949,320	-		MIT1002_03529	0.84	+1.4
3,949,320	-		MIT1002_03529	0.84	+0.5
3,949,372	+				+0.2
3,949,382	+				-1.4
3,949,422	+				+1.4
3,949,458	-				+0.3
3,949,531	-				-2.4
3,949,649	-				-1.8
3,949,694	+				+0.1
3,949,702	+				+0.1
3,949,722	+				+0.4
3,949,884	+		MIT1002_03530	0.20	-0.5
3,949,891	-		MIT1002_03530	0.20	-0.5
3,949,937	+		MIT1002_03530	0.23	-0.5
3,950,060	+		MIT1002_03530	0.31	+0.5
3,950,068	-		MIT1002_03530	0.31	+0.6
3,950,092	-		MIT1002_03530	0.33	-0.8
3,950,100	+		MIT1002_03530	0.33	-5.1
3,950,143	-		MIT1002_03530	0.36	-2.0
3,950,162	+		MIT1002_03530	0.37	-0.5
3,950,212	-		MIT1002_03530	0.40	-0.8
3,950,320	-		MIT1002_03530	0.47	-0.1
3,950,355	-		MIT1002_03530	0.49	-1.1
3,950,386	+		MIT1002_03530	0.51	+0.4
3,950,522	+		MIT1002_03530	0.60	+0.1
3,950,530	-		MIT1002_03530	0.60	-0.5
3,950,530	-		MIT1002_03530	0.60	+0.1
3,950,530	-		MIT1002_03530	0.60	-1.2
3,950,532	-		MIT1002_03530	0.60	-2.1
3,950,748	+		MIT1002_03530	0.74	+1.1
3,950,758	+		MIT1002_03530	0.74	-1.1
3,950,758	+		MIT1002_03530	0.74	-0.2
3,950,758	+		MIT1002_03530	0.74	+0.7
3,950,766	-		MIT1002_03530	0.75	+0.4
3,950,766	-		MIT1002_03530	0.75	+1.6
3,950,822	-		MIT1002_03530	0.78	+0.2
3,950,932	-		MIT1002_03530	0.85	-0.1
3,951,043	-				+0.1
3,951,043	-				+1.3
3,951,107	+				+0.6
3,951,122	-				+1.0
3,951,182	+				+0.5
3,951,196	+				-0.1
3,951,230	-		MIT1002_03531	0.29	+0.5
3,951,249	+		MIT1002_03531	0.40	-0.3
3,951,269	+		MIT1002_03531	0.51	-0.6
3,951,272	-		MIT1002_03531	0.53	-0.9
3,951,295	-		MIT1002_03531	0.66	+0.7
3,951,535	+				-1.1
3,951,627	-				+0.6
3,951,634	-				-1.3
3,951,758	+				+0.7
3,951,758	+				-0.3
3,951,758	+				-0.4
3,951,766	-		MIT1002_03532	0.10	+0.2
3,951,766	-		MIT1002_03532	0.10	-0.8
3,951,766	-		MIT1002_03532	0.10	-0.3
3,951,766	-		MIT1002_03532	0.10	+0.1
3,951,778	+		MIT1002_03532	0.11	-0.4
3,951,778	+		MIT1002_03532	0.11	-1.8
3,951,786	-		MIT1002_03532	0.12	-1.4
3,951,786	-		MIT1002_03532	0.12	+0.9
3,951,786	-		MIT1002_03532	0.12	+0.4
3,951,786	-		MIT1002_03532	0.12	+0.5
3,951,786	-		MIT1002_03532	0.12	+1.1
3,951,786	-		MIT1002_03532	0.12	+0.5
3,951,813	+		MIT1002_03532	0.14	-0.0
3,951,856	+		MIT1002_03532	0.17	-1.1
3,951,864	-		MIT1002_03532	0.17	-0.5
3,951,923	-		MIT1002_03532	0.22	-0.6
3,951,970	+		MIT1002_03532	0.25	-1.0
3,951,970	+		MIT1002_03532	0.25	-0.2
3,951,978	-		MIT1002_03532	0.26	-0.4
3,951,978	-		MIT1002_03532	0.26	-0.3
3,951,982	+		MIT1002_03532	0.26	-0.4
3,951,990	-		MIT1002_03532	0.27	+0.1
3,951,990	-		MIT1002_03532	0.27	-0.3
3,952,019	+		MIT1002_03532	0.29	+0.2
3,952,019	+		MIT1002_03532	0.29	-0.1
3,952,019	+		MIT1002_03532	0.29	+0.1
3,952,040	+		MIT1002_03532	0.30	-1.2
3,952,103	+		MIT1002_03532	0.35	-1.5
3,952,103	+		MIT1002_03532	0.35	-0.8
3,952,103	+		MIT1002_03532	0.35	+0.2
3,952,103	+		MIT1002_03532	0.35	-0.7
3,952,103	+		MIT1002_03532	0.35	+1.9
3,952,111	-		MIT1002_03532	0.36	+0.5
3,952,111	-		MIT1002_03532	0.36	-0.4
3,952,111	-		MIT1002_03532	0.36	-1.3
3,952,111	-		MIT1002_03532	0.36	-0.0
3,952,111	-		MIT1002_03532	0.36	-0.1
3,952,118	-		MIT1002_03532	0.36	-0.2
3,952,123	-		MIT1002_03532	0.37	+0.3