Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03370

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
3,769,825	+		MIT1002_03369	0.41	-0.6
3,769,865	-		MIT1002_03369	0.44	-0.1
3,769,865	-		MIT1002_03369	0.44	-0.3
3,769,917	+		MIT1002_03369	0.48	-0.3
3,769,951	-		MIT1002_03369	0.50	+0.4
3,770,031	+		MIT1002_03369	0.56	+0.9
3,770,182	+		MIT1002_03369	0.68	+0.3
3,770,182	+		MIT1002_03369	0.68	-1.7
3,770,190	-		MIT1002_03369	0.68	+0.4
3,770,190	-		MIT1002_03369	0.68	-0.2
3,770,190	-		MIT1002_03369	0.68	-2.4
3,770,190	-		MIT1002_03369	0.68	+1.3
3,770,220	+		MIT1002_03369	0.71	-0.5
3,770,252	+		MIT1002_03369	0.73	+0.5
3,770,260	-		MIT1002_03369	0.74	+0.8
3,770,260	-		MIT1002_03369	0.74	+1.7
3,770,275	-		MIT1002_03369	0.75	+1.1
3,770,374	+		MIT1002_03369	0.82	+0.7
3,770,385	+		MIT1002_03369	0.83	-0.6
3,770,393	-		MIT1002_03369	0.84	-1.2
3,770,393	-		MIT1002_03369	0.84	+0.3
3,770,527	-				+0.5
3,770,590	-				-1.9
3,770,861	+				+0.7
3,770,883	-				-2.1
3,771,004	+		MIT1002_03370	0.19	+0.5
3,771,155	+		MIT1002_03370	0.33	-0.7
3,771,361	+		MIT1002_03370	0.51	-0.8
3,771,369	-		MIT1002_03370	0.52	+1.3
3,771,384	-		MIT1002_03370	0.53	+0.1
3,771,398	+		MIT1002_03370	0.55	+0.7
3,771,450	-		MIT1002_03370	0.59	-0.9
3,771,512	+		MIT1002_03370	0.65	-0.2
3,771,517	+		MIT1002_03370	0.65	-0.0
3,771,524	+		MIT1002_03370	0.66	+0.8
3,771,531	-		MIT1002_03370	0.67	-0.5
3,771,538	+		MIT1002_03370	0.67	+1.2
3,771,538	+		MIT1002_03370	0.67	+0.1
3,771,546	-		MIT1002_03370	0.68	-0.3
3,771,615	-		MIT1002_03370	0.74	+0.7
3,771,650	+		MIT1002_03370	0.78	-0.1
3,771,682	+		MIT1002_03370	0.81	-1.1
3,771,699	-		MIT1002_03370	0.82	-0.3
3,771,700	-		MIT1002_03370	0.82	-0.4
3,771,704	-		MIT1002_03370	0.83	-0.8
3,771,710	-		MIT1002_03370	0.83	+0.9
3,771,715	-		MIT1002_03370	0.84	+0.3
3,771,767	-		MIT1002_03370	0.88	-0.4
3,771,768	-		MIT1002_03370	0.88	-1.0
3,771,962	+				+0.4
3,771,970	-				-1.6
3,772,110	+		MIT1002_03371	0.17	-2.9
3,772,145	+		MIT1002_03371	0.23	-3.4
3,772,170	-		MIT1002_03371	0.27	-2.2
3,772,258	-		MIT1002_03371	0.42	-2.2
3,772,372	-		MIT1002_03371	0.61	-2.0
3,772,602	+				+0.9
3,772,618	-				-0.6
3,772,619	+				+1.3
3,772,632	-				+1.0
3,772,632	-				-2.3
3,772,634	+				-0.3
3,772,652	+				-1.0
3,772,658	+				-0.4
3,772,664	+				-1.9
3,772,677	+				+0.1
3,772,682	-				+0.5
3,772,684	+				-1.7
3,772,730	-				+1.1
3,772,789	+				-0.3
3,772,822	+				+0.1