Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03331

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
3,720,818	-		MIT1002_03330	0.27	-0.3
3,720,836	-		MIT1002_03330	0.29	+0.8
3,720,888	-		MIT1002_03330	0.34	-2.5
3,720,935	+		MIT1002_03330	0.38	-1.2
3,720,943	-		MIT1002_03330	0.38	-3.1
3,720,943	-		MIT1002_03330	0.38	+0.8
3,720,949	+		MIT1002_03330	0.39	+0.4
3,720,965	-		MIT1002_03330	0.40	-0.7
3,721,017	+		MIT1002_03330	0.45	+0.2
3,721,025	-		MIT1002_03330	0.46	-2.3
3,721,213	+		MIT1002_03330	0.62	+2.1
3,721,220	-		MIT1002_03330	0.63	-1.3
3,721,222	+		MIT1002_03330	0.63	-0.5
3,721,243	+		MIT1002_03330	0.65	+0.2
3,721,320	-		MIT1002_03330	0.72	-1.2
3,721,353	+		MIT1002_03330	0.75	-0.4
3,721,366	-		MIT1002_03330	0.76	+0.8
3,721,448	-		MIT1002_03330	0.83	+0.4
3,721,518	+		MIT1002_03330	0.89	+0.1
3,721,546	+				+0.2
3,721,549	-				-0.9
3,721,592	-				-1.7
3,721,592	-				+0.4
3,721,776	+				-2.3
3,721,785	+				-2.9
3,721,853	-				-3.1
3,721,856	+				-4.4
3,721,856	+				-4.1
3,721,864	-				-3.1
3,721,864	-				-3.1
3,721,898	+				-2.5
3,721,945	+		MIT1002_03331	0.10	-1.7
3,721,953	-		MIT1002_03331	0.11	-1.0
3,722,058	-		MIT1002_03331	0.17	-2.9
3,722,097	-		MIT1002_03331	0.19	-4.8
3,722,171	+		MIT1002_03331	0.24	-1.2
3,722,402	-		MIT1002_03331	0.37	-4.4
3,722,412	-		MIT1002_03331	0.37	-3.9
3,722,584	-		MIT1002_03331	0.47	-2.9
3,722,621	+		MIT1002_03331	0.49	-4.0
3,722,633	+		MIT1002_03331	0.50	-2.5
3,722,719	+		MIT1002_03331	0.55	-1.4
3,722,738	+		MIT1002_03331	0.56	-3.1
3,722,738	+		MIT1002_03331	0.56	-1.5
3,722,755	+		MIT1002_03331	0.57	-1.7
3,722,784	+		MIT1002_03331	0.59	-3.8
3,722,787	-		MIT1002_03331	0.59	-3.6
3,723,074	+		MIT1002_03331	0.76	-2.6
3,723,121	-		MIT1002_03331	0.78	-3.0
3,723,232	-		MIT1002_03331	0.85	-3.0
3,723,237	-		MIT1002_03331	0.85	-2.7
3,723,244	+		MIT1002_03331	0.85	-4.0
3,723,262	+		MIT1002_03331	0.86	-1.0
3,723,289	-		MIT1002_03331	0.88	-3.5
3,723,396	+				-6.2
3,723,396	+				-3.9
3,723,396	+				-3.2
3,723,396	+				-4.8
3,723,465	+				-3.2
3,723,485	-				-4.5
3,723,492	-				-1.0
3,723,537	+				-4.0
3,723,545	-				-2.3
3,723,545	-				-1.2
3,723,625	+				-0.0
3,723,700	+				+0.2
3,723,703	-				-0.0
3,723,703	-				+0.1
3,723,708	-				+0.0
3,723,708	-				+1.2
3,723,710	+				+0.2
3,723,817	+				+0.3
3,723,835	-				-2.6
3,723,904	+		MIT1002_03332	0.20	+0.6
3,723,925	+		MIT1002_03332	0.23	+1.2
3,723,931	-		MIT1002_03332	0.24	+0.5
3,723,931	-		MIT1002_03332	0.24	-0.2
3,723,933	-		MIT1002_03332	0.24	+0.2
3,723,958	-		MIT1002_03332	0.28	-0.1
3,723,959	-		MIT1002_03332	0.28	-0.4
3,724,007	+		MIT1002_03332	0.35	+1.1
3,724,034	-		MIT1002_03332	0.39	+0.0
3,724,059	+		MIT1002_03332	0.42	+1.3
3,724,081	+		MIT1002_03332	0.46	-0.9
3,724,110	+		MIT1002_03332	0.50	-0.7
3,724,142	-		MIT1002_03332	0.55	+1.7
3,724,199	+		MIT1002_03332	0.63	-1.3
3,724,232	+		MIT1002_03332	0.68	+1.1
3,724,250	-		MIT1002_03332	0.71	+0.2
3,724,255	-		MIT1002_03332	0.71	-0.6
3,724,315	+		MIT1002_03332	0.80	+0.7
3,724,396	-				-1.8
3,724,450	-				-0.3