Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03270

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
3,641,140	+				-0.3
3,641,163	+				+0.9
3,641,165	+				+0.2
3,641,250	+				-0.3
3,641,250	+				-0.8
3,641,252	-				-1.8
3,641,258	-				+1.1
3,641,325	+				-1.2
3,641,423	-				-0.6
3,641,457	+				+0.5
3,641,457	+				+0.9
3,641,457	+				-2.7
3,641,457	+				-0.1
3,641,462	+				+0.7
3,641,615	-		MIT1002_03269	0.37	+0.7
3,641,674	+		MIT1002_03269	0.47	-0.5
3,641,891	+		MIT1002_03269	0.86	-0.7
3,641,918	+				-0.8
3,641,950	+				+1.4
3,641,963	-				+0.6
3,641,971	-				+0.5
3,642,033	-				+1.5
3,642,064	-				+0.5
3,642,121	+				-0.8
3,642,130	+				+0.6
3,642,169	+				+1.6
3,642,201	+				-5.0
3,642,213	+				-0.5
3,642,213	+				+0.5
3,642,221	-				+0.4
3,642,221	-				+1.1
3,642,252	-		MIT1002_03270	0.11	-2.4
3,642,269	+		MIT1002_03270	0.12	+0.4
3,642,300	+		MIT1002_03270	0.15	-0.4
3,642,308	-		MIT1002_03270	0.15	+0.3
3,642,378	-		MIT1002_03270	0.20	-0.0
3,642,386	+		MIT1002_03270	0.21	+0.9
3,642,444	+		MIT1002_03270	0.25	-0.5
3,642,444	+		MIT1002_03270	0.25	+0.5
3,642,452	-		MIT1002_03270	0.25	+1.9
3,642,452	-		MIT1002_03270	0.25	+0.3
3,642,452	-		MIT1002_03270	0.25	+1.3
3,642,452	-		MIT1002_03270	0.25	-2.3
3,642,456	+		MIT1002_03270	0.26	-1.1
3,642,480	+		MIT1002_03270	0.27	-0.4
3,642,495	-		MIT1002_03270	0.28	-1.8
3,642,520	+		MIT1002_03270	0.30	-1.6
3,642,524	+		MIT1002_03270	0.31	-2.9
3,642,530	+		MIT1002_03270	0.31	-1.5
3,642,538	-		MIT1002_03270	0.31	+0.8
3,642,565	-		MIT1002_03270	0.33	+0.6
3,642,570	-		MIT1002_03270	0.34	-0.8
3,642,645	+		MIT1002_03270	0.39	-1.3
3,642,664	+		MIT1002_03270	0.40	+0.7
3,642,664	+		MIT1002_03270	0.40	-0.2
3,642,672	-		MIT1002_03270	0.41	-0.6
3,642,672	-		MIT1002_03270	0.41	+0.7
3,642,672	-		MIT1002_03270	0.41	+0.6
3,642,672	-		MIT1002_03270	0.41	+1.2
3,642,788	+		MIT1002_03270	0.49	-1.1
3,642,823	+		MIT1002_03270	0.52	+1.8
3,642,831	-		MIT1002_03270	0.52	+0.7
3,642,831	-		MIT1002_03270	0.52	-2.4
3,642,917	+		MIT1002_03270	0.58	+1.2
3,642,925	-		MIT1002_03270	0.59	-0.4
3,642,927	+		MIT1002_03270	0.59	-0.1
3,642,984	+		MIT1002_03270	0.63	+0.4
3,642,987	+		MIT1002_03270	0.63	-0.2
3,643,086	+		MIT1002_03270	0.70	+0.8
3,643,091	+		MIT1002_03270	0.71	+1.1
3,643,094	-		MIT1002_03270	0.71	+0.9
3,643,094	-		MIT1002_03270	0.71	-1.8
3,643,114	-		MIT1002_03270	0.72	-1.7
3,643,127	+		MIT1002_03270	0.73	+0.1
3,643,145	+		MIT1002_03270	0.74	-3.0
3,643,251	+		MIT1002_03270	0.82	+1.7
3,643,253	+		MIT1002_03270	0.82	-1.5
3,643,269	+		MIT1002_03270	0.83	-0.7
3,643,276	-		MIT1002_03270	0.84	+1.8
3,643,339	+		MIT1002_03270	0.88	+0.1
3,643,361	+		MIT1002_03270	0.90	-0.1
3,643,376	-				-0.4
3,643,421	-				+0.9
3,643,426	+				+0.8
3,643,431	+				-0.5
3,643,441	-				+0.4
3,643,443	+				+0.7
3,643,443	+				-0.6
3,643,451	-				+0.8
3,643,516	+				-2.6
3,643,542	-				+0.3
3,643,552	-				-0.3
3,643,569	+				-1.7
3,643,569	+				-0.5
3,643,577	-				+1.1
3,643,590	+				+0.1
3,643,695	-		MIT1002_03271	0.11	-1.4
3,643,724	+		MIT1002_03271	0.12	-0.8
3,643,869	+		MIT1002_03271	0.21	-0.3
3,643,869	-		MIT1002_03271	0.21	+0.3
3,643,877	-		MIT1002_03271	0.22	+0.5
3,643,885	-		MIT1002_03271	0.22	+0.1
3,643,924	+		MIT1002_03271	0.24	-1.3
3,644,016	+		MIT1002_03271	0.30	+0.1
3,644,039	-		MIT1002_03271	0.31	+1.1
3,644,082	-		MIT1002_03271	0.34	-1.1
3,644,141	-		MIT1002_03271	0.37	+0.2
3,644,187	-		MIT1002_03271	0.40	+1.0
3,644,191	+		MIT1002_03271	0.40	+2.1
3,644,209	+		MIT1002_03271	0.41	+0.8
3,644,282	+		MIT1002_03271	0.46	-0.2
3,644,290	-		MIT1002_03271	0.46	-0.2
3,644,300	-		MIT1002_03271	0.47	-0.2
3,644,311	-		MIT1002_03271	0.48	-0.8
3,644,344	-		MIT1002_03271	0.50	+0.1
3,644,410	+		MIT1002_03271	0.54	-0.1
3,644,487	-		MIT1002_03271	0.58	-0.4