Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03266

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
3,636,498	+				+0.2
3,636,538	-				-0.4
3,636,603	-				+1.0
3,636,647	-				-0.5
3,636,679	-		MIT1002_03265	0.13	+0.6
3,636,719	+		MIT1002_03265	0.17	+2.2
3,636,724	-		MIT1002_03265	0.18	+0.2
3,636,729	-		MIT1002_03265	0.19	+0.8
3,636,754	+		MIT1002_03265	0.21	+0.1
3,636,762	-		MIT1002_03265	0.22	-1.4
3,636,775	-		MIT1002_03265	0.24	+0.3
3,636,840	-		MIT1002_03265	0.31	-0.0
3,636,844	+		MIT1002_03265	0.32	+1.4
3,636,853	+		MIT1002_03265	0.33	-0.6
3,636,861	-		MIT1002_03265	0.34	+0.5
3,636,891	-		MIT1002_03265	0.37	+1.0
3,636,994	+		MIT1002_03265	0.49	-2.1
3,637,002	+		MIT1002_03265	0.50	+0.2
3,637,002	+		MIT1002_03265	0.50	-0.5
3,637,002	+		MIT1002_03265	0.50	+0.5
3,637,002	+		MIT1002_03265	0.50	+0.8
3,637,003	-		MIT1002_03265	0.50	+0.8
3,637,003	-		MIT1002_03265	0.50	+0.3
3,637,010	-		MIT1002_03265	0.51	+0.6
3,637,081	-		MIT1002_03265	0.59	-0.2
3,637,081	-		MIT1002_03265	0.59	-0.3
3,637,085	-		MIT1002_03265	0.60	+2.0
3,637,096	+		MIT1002_03265	0.61	-0.2
3,637,116	+		MIT1002_03265	0.63	-0.2
3,637,124	+		MIT1002_03265	0.64	+1.4
3,637,147	-		MIT1002_03265	0.67	+1.5
3,637,170	+		MIT1002_03265	0.70	-0.5
3,637,198	+		MIT1002_03265	0.73	+0.3
3,637,305	+		MIT1002_03265	0.85	-0.2
3,637,313	-		MIT1002_03265	0.86	+0.2
3,637,337	+		MIT1002_03265	0.89	-0.1
3,637,388	+				-2.3
3,637,396	-				-2.0
3,637,400	+				+0.1
3,637,408	-				-0.3
3,637,426	+				-0.4
3,637,426	+				+0.2
3,637,426	+				-0.9
3,637,426	+				-0.1
3,637,426	+				-0.7
3,637,426	+				+0.3
3,637,426	+				+2.3
3,637,434	+				+0.9
3,637,434	+				-1.0
3,637,434	-				+0.5
3,637,434	-				-0.3
3,637,442	-				+0.6
3,637,458	+				-0.5
3,637,458	+				+1.4
3,637,458	+				+0.2
3,637,458	+				+2.6
3,637,458	+				-0.6
3,637,458	+				+0.3
3,637,458	+				-0.9
3,637,458	+				+0.6
3,637,466	-				+0.3
3,637,466	-				-0.9
3,637,466	-				-1.3
3,637,466	-				+0.6
3,637,466	-				+0.7
3,637,466	-				-0.6
3,637,466	-				+0.5
3,637,466	-				-0.8
3,637,466	-				+1.5
3,637,466	-				-0.5
3,637,466	-				+0.4
3,637,466	-				-1.3
3,637,466	-				+0.3
3,637,478	+				+0.2
3,637,504	-		MIT1002_03266	0.12	-0.5
3,637,513	-		MIT1002_03266	0.14	+1.4
3,637,522	+		MIT1002_03266	0.16	+1.9
3,637,525	-		MIT1002_03266	0.17	+0.8
3,637,541	-		MIT1002_03266	0.20	+0.6
3,637,572	+		MIT1002_03266	0.27	+0.9
3,637,580	-		MIT1002_03266	0.29	+0.2
3,637,718	-		MIT1002_03266	0.60	-0.3
3,637,852	-				+0.1
3,637,879	+				-0.9
3,637,879	-				+0.3
3,637,879	-				-0.5
3,637,964	-				+0.3
3,637,982	-				-2.0
3,638,004	+				+0.8
3,638,009	+				-0.4
3,638,035	+				-1.3
3,638,040	-				+0.1
3,638,158	+		MIT1002_03267	0.13	-0.4
3,638,160	+		MIT1002_03267	0.14	-0.0
3,638,160	+		MIT1002_03267	0.14	-0.2
3,638,160	+		MIT1002_03267	0.14	-0.4
3,638,166	-		MIT1002_03267	0.14	+0.4
3,638,168	-		MIT1002_03267	0.14	-2.2
3,638,216	+		MIT1002_03267	0.16	-1.4
3,638,238	-		MIT1002_03267	0.18	+0.2
3,638,256	+		MIT1002_03267	0.19	+0.9
3,638,308	-		MIT1002_03267	0.21	+1.0
3,638,330	+		MIT1002_03267	0.23	+1.1
3,638,330	+		MIT1002_03267	0.23	+0.4
3,638,338	-		MIT1002_03267	0.23	-1.5
3,638,338	-		MIT1002_03267	0.23	-0.1
3,638,338	-		MIT1002_03267	0.23	+1.1
3,638,350	-		MIT1002_03267	0.24	+0.5
3,638,397	+		MIT1002_03267	0.26	-2.0
3,638,491	+		MIT1002_03267	0.31	+2.8
3,638,491	+		MIT1002_03267	0.31	-0.7
3,638,491	+		MIT1002_03267	0.31	-0.8
3,638,499	-		MIT1002_03267	0.31	-0.2
3,638,499	-		MIT1002_03267	0.31	+0.5
3,638,520	+		MIT1002_03267	0.33	-1.3
3,638,520	+		MIT1002_03267	0.33	+0.2
3,638,530	-		MIT1002_03267	0.33	+1.0
3,638,698	+		MIT1002_03267	0.42	-1.1
3,638,763	-		MIT1002_03267	0.45	+1.0
3,638,787	+		MIT1002_03267	0.47	+1.1
3,638,797	-		MIT1002_03267	0.47	-0.5
3,638,797	-		MIT1002_03267	0.47	+0.2
3,638,802	-		MIT1002_03267	0.48	-0.1
3,638,807	-		MIT1002_03267	0.48	-1.5
3,638,813	+		MIT1002_03267	0.48	+0.2
3,638,813	+		MIT1002_03267	0.48	-0.0
3,638,865	+		MIT1002_03267	0.51	+0.1