Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03090

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
3,444,773	+		MIT1002_03089	0.23	-0.5
3,444,773	+		MIT1002_03089	0.23	-1.6
3,444,773	+		MIT1002_03089	0.23	-1.1
3,444,781	-		MIT1002_03089	0.23	+0.5
3,444,781	-		MIT1002_03089	0.23	-0.0
3,444,781	-		MIT1002_03089	0.23	-0.0
3,444,781	-		MIT1002_03089	0.23	+0.1
3,444,783	+		MIT1002_03089	0.23	-0.2
3,444,783	+		MIT1002_03089	0.23	+0.5
3,444,783	+		MIT1002_03089	0.23	+2.3
3,444,791	-		MIT1002_03089	0.24	+0.9
3,444,809	+		MIT1002_03089	0.26	-0.6
3,444,810	-		MIT1002_03089	0.26	+0.1
3,444,888	-		MIT1002_03089	0.32	-0.6
3,444,893	+		MIT1002_03089	0.33	-0.4
3,444,907	-		MIT1002_03089	0.34	+1.0
3,444,982	+		MIT1002_03089	0.41	+0.5
3,445,048	-		MIT1002_03089	0.46	-1.4
3,445,095	-		MIT1002_03089	0.50	-0.6
3,445,138	+		MIT1002_03089	0.54	-0.3
3,445,248	-		MIT1002_03089	0.64	-0.5
3,445,292	-		MIT1002_03089	0.67	+0.8
3,445,359	-		MIT1002_03089	0.73	+1.3
3,445,359	-		MIT1002_03089	0.73	+0.9
3,445,370	+		MIT1002_03089	0.74	+1.2
3,445,378	-		MIT1002_03089	0.75	-0.1
3,445,423	-		MIT1002_03089	0.79	+1.4
3,445,433	-		MIT1002_03089	0.80	-1.7
3,445,485	+		MIT1002_03089	0.84	+1.3
3,445,493	-		MIT1002_03089	0.85	-0.9
3,445,493	-		MIT1002_03089	0.85	-1.1
3,445,500	+		MIT1002_03089	0.85	+1.2
3,445,502	+		MIT1002_03089	0.85	-0.7
3,445,502	+		MIT1002_03089	0.85	-1.2
3,445,502	+		MIT1002_03089	0.85	-0.5
3,445,508	-		MIT1002_03089	0.86	-0.7
3,445,510	-		MIT1002_03089	0.86	+0.7
3,445,510	-		MIT1002_03089	0.86	-0.1
3,445,510	-		MIT1002_03089	0.86	-0.4
3,445,512	+		MIT1002_03089	0.86	+0.4
3,445,582	+				-1.4
3,445,590	-				+0.3
3,445,657	-				+0.4
3,445,758	-				-2.0
3,445,800	-				+1.0
3,445,853	-		MIT1002_03090	0.15	-2.2
3,445,862	-		MIT1002_03090	0.16	-0.2
3,446,066	-		MIT1002_03090	0.47	+1.6
3,446,105	-		MIT1002_03090	0.53	+0.4
3,446,105	-		MIT1002_03090	0.53	+1.0
3,446,164	+		MIT1002_03090	0.62	+2.4
3,446,198	+		MIT1002_03090	0.68	-0.0
3,446,255	-		MIT1002_03090	0.76	+0.2
3,446,265	+		MIT1002_03090	0.78	-0.1
3,446,280	-		MIT1002_03090	0.80	-0.1
3,446,341	+		MIT1002_03090	0.90	+1.2
3,446,349	-				+2.8
3,446,501	+				+0.7
3,446,506	+				+0.2
3,446,535	-				-0.2
3,446,728	+				+0.2
3,446,747	+				-0.6
3,446,814	-				+1.3
3,446,814	-				-0.8
3,446,858	+				+0.4
3,446,916	+				+0.9
3,446,924	-				+0.8
3,446,934	-				-2.0
3,447,036	+				-0.8
3,447,040	+				-0.1
3,447,057	+				-2.1
3,447,057	+				-1.3
3,447,065	-				-0.3
3,447,123	+		MIT1002_03091	0.27	-0.3
3,447,138	+		MIT1002_03091	0.31	-1.7
3,447,243	+		MIT1002_03091	0.61	-2.6
3,447,298	-		MIT1002_03091	0.77	-0.9
3,447,324	-		MIT1002_03091	0.85	-1.6
3,447,336	-		MIT1002_03091	0.88	-0.7
3,447,360	-				-0.3
3,447,360	-				-0.6